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Molybdenum in PDB 1amf: Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate

Protein crystallography data

The structure of Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate, PDB code: 1amf was solved by Y.Hu, S.Rech, R.P.Gunsalus, D.C.Rees, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 1.75
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 82.570, 82.570, 81.510, 90.00, 90.00, 120.00
R / Rfree (%) 16.1 / 20.3

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate (pdb code 1amf). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate, PDB code: 1amf:

Molybdenum binding site 1 out of 1 in 1amf

Go back to Molybdenum Binding Sites List in 1amf
Molybdenum binding site 1 out of 1 in the Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Crystal Structure of Moda, A Molybdate Transport Protein, Complexed with Molybdate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo234

b:25.3
occ:1.00
MO A:MOO234 0.0 25.3 1.0
O1 A:MOO234 1.7 23.2 1.0
O3 A:MOO234 1.7 23.2 1.0
O4 A:MOO234 1.7 25.3 1.0
O2 A:MOO234 1.7 24.9 1.0
HH A:TYR170 3.2 0.0 1.0
HG A:SER12 3.4 0.0 1.0
H A:VAL152 3.4 0.0 1.0
HG A:SER39 3.4 0.0 1.0
H A:ALA11 3.4 0.0 1.0
H A:SER12 3.5 0.0 1.0
H A:SER39 3.5 0.0 1.0
H A:ALA125 3.7 0.0 1.0
CB A:ALA58 3.9 23.1 1.0
CG1 A:VAL152 4.0 23.7 1.0
OH A:TYR170 4.1 26.4 1.0
N A:ALA11 4.1 24.0 1.0
CD A:PRO124 4.1 24.0 1.0
CB A:ALA10 4.2 22.7 1.0
CE2 A:TYR170 4.2 25.6 1.0
CG1 A:VAL123 4.2 24.8 1.0
CB A:VAL152 4.3 24.8 1.0
OG A:SER12 4.3 23.7 1.0
N A:VAL152 4.4 25.7 1.0
OG A:SER39 4.4 25.2 1.0
N A:SER12 4.4 22.6 1.0
N A:SER39 4.4 25.7 1.0
CG A:PRO124 4.5 23.6 1.0
CB A:PRO124 4.5 25.6 1.0
CA A:SER38 4.6 24.9 1.0
CB A:ALA11 4.6 20.5 1.0
CZ A:TYR170 4.7 28.4 1.0
N A:ALA125 4.7 27.8 1.0
CA A:ALA10 4.7 23.5 1.0
C A:ALA10 4.7 20.0 1.0
CA A:ALA11 4.8 25.2 1.0
N A:PRO124 4.8 26.4 1.0
CB A:SER12 4.8 20.8 1.0
O A:ALA37 4.9 25.5 1.0
CA A:VAL152 5.0 26.5 1.0
CB A:ALA125 5.0 24.7 1.0

Reference:

Y.Hu, S.Rech, R.P.Gunsalus, D.C.Rees. Crystal Structure of the Molybdate Binding Protein Moda. Nat.Struct.Biol. V. 4 703 1997.
ISSN: ISSN 1072-8368
PubMed: 9302996
DOI: 10.1038/NSB0997-703
Page generated: Tue Dec 15 05:15:10 2020

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