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Molybdenum in PDB 1q16: Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli

Enzymatic activity of Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli

All present enzymatic activity of Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli:
1.7.99.4;

Protein crystallography data

The structure of Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli, PDB code: 1q16 was solved by M.G.Bertero, N.C.J.Strynadka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.68 / 1.90
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 154.175, 241.376, 139.494, 90.00, 90.00, 90.00
R / Rfree (%) 20.2 / 23

Other elements in 1q16:

The structure of Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli also contains other interesting chemical elements:

Iron (Fe) 21 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli (pdb code 1q16). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli, PDB code: 1q16:

Molybdenum binding site 1 out of 1 in 1q16

Go back to Molybdenum Binding Sites List in 1q16
Molybdenum binding site 1 out of 1 in the Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Crystal Structure of Nitrate Reductase A, Narghi, From Escherichia Coli within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo1302

b:40.4
occ:1.00
 OD1 A:ASP222 2.0 31.4 1.0
S13 A:MD11300 2.4 30.1 1.0
S13 A:MD11301 2.4 34.2 1.0
S12 A:MD11300 2.4 39.0 1.0
S12 A:MD11301 2.4 32.9 1.0
OD2 A:ASP222 2.5 25.9 1.0
CG A:ASP222 2.5 26.3 1.0
C13 A:MD11301 3.5 29.5 1.0
C12 A:MD11301 3.5 29.5 1.0
C13 A:MD11300 3.5 32.7 1.0
C12 A:MD11300 3.5 35.5 1.0
N A:GLY579 3.7 29.3 1.0
CA A:GLY579 3.8 28.0 1.0
ND2 A:ASN52 3.9 26.4 1.0
CB A:ASP222 4.0 24.1 1.0
C A:VAL578 4.2 27.6 1.0
CE1 A:HIS1092 4.3 27.6 1.0
CB A:VAL578 4.4 26.2 1.0
CB A:TYR220 4.4 26.8 1.0
CE1 A:HIS1098 4.5 29.6 1.0
CD2 A:TYR220 4.6 30.5 1.0
O A:VAL578 4.7 28.5 1.0
CA A:VAL578 4.8 25.8 1.0
C14 A:MD11301 4.9 25.7 1.0
CA A:ASP222 4.9 21.6 1.0
C14 A:MD11300 4.9 32.3 1.0
CG A:TYR220 5.0 30.2 1.0
CG A:ASN52 5.0 27.5 1.0

Reference:

M.G.Bertero, R.A.Rothery, M.Palak, C.Hou, D.Lim, F.Blasco, J.H.Weiner, N.C.J.Strynadka. Insights Into the Respiratory Electron Transfer Pathway From the Structure of Nitrate Reductase A Nat.Struct.Biol. V. 10 681 2003.
ISSN: ISSN 1072-8368
PubMed: 12910261
DOI: 10.1038/NSB969
Page generated: Sun Oct 6 15:28:44 2024

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