Molybdenum in PDB 1sij: Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-

Enzymatic activity of Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-

All present enzymatic activity of Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-:
1.2.3.1;

Protein crystallography data

The structure of Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-, PDB code: 1sij was solved by D.R.Boer, A.Thapper, C.D.Brondino, M.J.Romao, J.J.G.Moura, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	20.00 / 2.30
*Space group*	P 6₁ 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	142.780, 142.780, 161.577, 90.00, 90.00, 120.00
*R / R_free (%)*	18.1 / 22.3

Other elements in 1sij:

The structure of Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]- also contains other interesting chemical elements:

Magnesium	(Mg)	2 atoms
Arsenic	(As)	1 atom
Iron	(Fe)	4 atoms
Chlorine	(Cl)	3 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]- (pdb code 1sij). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-, PDB code: 1sij:

Molybdenum binding site 1 out of 1 in 1sij

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Molybdenum Binding Sites List in 1sij

Molybdenum binding site 1 out of 1 in the Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]-

Mono view

Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Crystal Structure of the Aldehyde Dehydrogenase (A.K.A. Aor or Mop) of Desulfovibrio Gigas Covalently Bound to [ASO3]- within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mo921 b:23.6 occ:0.60	MO	A:PCD921	0.0	23.6	0.6
	OM1	A:PCD921	1.7	21.0	0.6
	OR1	A:PCD921	1.7	21.0	0.6
	O1	A:AST922	1.9	27.8	0.5
	S7'	A:PCD921	2.3	21.2	1.0
	S8'	A:PCD921	2.3	22.1	1.0
	C7'	A:PCD921	3.2	21.0	1.0
	C8'	A:PCD921	3.2	20.6	1.0
	AS	A:AST922	3.3	31.8	0.5
	OE1	A:GLU869	3.9	20.8	1.0
	CA	A:GLY422	3.9	18.7	1.0
	CA	A:GLY696	4.2	21.5	1.0
	CD	A:GLU869	4.2	20.2	1.0
	O2	A:AST922	4.3	29.5	0.5
	O	A:SER695	4.4	22.2	1.0
	N	A:GLY697	4.4	21.3	1.0
	N	A:ARG533	4.4	17.6	1.0
	N	A:GLY422	4.5	17.6	1.0
	CA	A:ARG533	4.5	17.7	1.0
	O3	A:AST922	4.6	31.5	0.5
	C6'	A:PCD921	4.6	20.2	1.0
	CG	A:GLU869	4.7	20.2	1.0
	C9'	A:PCD921	4.7	21.1	1.0
	OE2	A:GLU869	4.7	19.4	1.0
	CB	A:ALA531	4.8	19.6	1.0
	CE1	A:HIS653	4.8	20.3	1.0
	C	A:GLY696	4.8	21.7	1.0
	C	A:PHE421	4.8	16.9	1.0
	O	A:PHE421	4.9	16.7	1.0

Reference:

D.R.Boer, A.Thapper, C.D.Brondino, M.J.Romao, J.J.G.Moura. X-Ray Crystal Structure and Epr Spectra of "Arsenite-Inhibited" Desulfovibriogigas Aldehyde Dehydrogenase: A Member of the Xanthine Oxidase Family J.Am.Chem.Soc. V. 126 8614 2004.
ISSN: ISSN 0002-7863
PubMed: 15250689
DOI: 10.1021/JA0490222

Page generated: Sun Oct 6 15:31:55 2024

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