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Molybdenum in PDB 1vlb: Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A

Enzymatic activity of Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A

All present enzymatic activity of Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A:
1.2.3.1;

Protein crystallography data

The structure of Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A, PDB code: 1vlb was solved by J.M.Rebelo, J.M.Dias, R.Huber, J.J.G.Moura, M.J.Romao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.40 / 1.28
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 141.780, 141.780, 160.870, 90.00, 90.00, 120.00
R / Rfree (%) 14.8 / 19.3

Other elements in 1vlb:

The structure of Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A also contains other interesting chemical elements:

Magnesium (Mg) 2 atoms
Iron (Fe) 4 atoms
Chlorine (Cl) 3 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A (pdb code 1vlb). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A, PDB code: 1vlb:

Molybdenum binding site 1 out of 1 in 1vlb

Go back to Molybdenum Binding Sites List in 1vlb
Molybdenum binding site 1 out of 1 in the Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas at 1.28 A within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo921

b:17.5
occ:1.00
MO A:PCD921 0.0 17.5 1.0
OM1 A:PCD921 1.7 17.9 1.0
OR1 A:PCD921 1.8 17.5 1.0
OM2 A:PCD921 2.0 16.4 1.0
S7' A:PCD921 2.4 16.4 1.0
S8' A:PCD921 2.5 15.8 1.0
C7' A:PCD921 3.4 16.1 1.0
C8' A:PCD921 3.5 15.3 1.0
OE1 A:GLU869 3.5 17.1 1.0
CA A:GLY422 4.0 15.6 1.0
CD A:GLU869 4.0 17.6 1.0
CA A:GLY696 4.1 15.0 1.0
N A:GLY697 4.2 14.7 1.0
N A:ARG533 4.3 15.0 1.0
CA A:ARG533 4.3 16.1 1.0
O A:SER695 4.5 16.7 1.0
N A:GLY422 4.6 14.6 1.0
CB A:ALA531 4.6 15.8 1.0
CG A:GLU869 4.6 16.6 1.0
OE2 A:GLU869 4.6 16.3 1.0
O2 A:IPA914 4.7 17.6 1.0
C A:GLY696 4.7 15.6 1.0
O A:PHE421 4.8 15.6 1.0
C6' A:PCD921 4.8 15.5 1.0
C A:PHE421 4.8 14.8 1.0
C3 A:IPA914 4.8 18.9 1.0
C9' A:PCD921 4.9 14.4 1.0
C A:PHE532 5.0 14.6 1.0
CE1 A:HIS653 5.0 14.7 1.0

Reference:

J.M.Rebelo, J.M.Dias, R.Huber, J.J.G.Moura, M.J.Romao. Structure Refinement of the Aldehyde Oxidoreductase From Desulfovibrio Gigas (Mop) at 1.28 A J.Biol.Inorg.Chem. V. 6 791 2001.
ISSN: ISSN 0949-8257
PubMed: 11713686
DOI: 10.1007/S007750100255
Page generated: Tue Dec 15 05:16:39 2020

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