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Molybdenum in PDB 2a3p: Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate

Protein crystallography data

The structure of Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate, PDB code: 2a3p was solved by M.V.Pattarkine, Y.-H.Lee, J.J.Tanner, J.D.Wall, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 27.13 / 2.30
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 43.160, 43.700, 57.887, 90.00, 90.00, 90.00
R / Rfree (%) 19.1 / 24.8

Other elements in 2a3p:

The structure of Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate also contains other interesting chemical elements:

Iron (Fe) 4 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate (pdb code 2a3p). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate, PDB code: 2a3p:

Molybdenum binding site 1 out of 1 in 2a3p

Go back to Molybdenum Binding Sites List in 2a3p
Molybdenum binding site 1 out of 1 in the Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Structure of Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome with Bound Molybdate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo113

b:29.4
occ:1.00
MO A:MOO113 0.0 29.4 1.0
O1 A:MOO113 1.9 44.1 1.0
O2 A:MOO113 1.9 39.1 1.0
O4 A:MOO113 2.1 48.5 1.0
O3 A:MOO113 2.1 41.9 1.0
O2A A:HEM504 2.4 36.0 1.0
CGA A:HEM504 3.5 39.3 1.0
O1A A:HEM504 3.9 42.9 1.0
NZ A:LYS56 4.3 37.9 1.0
CE A:LYS56 4.5 41.9 1.0
N A:LYS14 4.6 36.7 1.0
CBA A:HEM504 4.7 34.7 1.0
CAA A:HEM504 4.8 37.8 1.0
CB A:THR13 4.8 40.8 1.0
CB A:LYS14 4.8 33.5 1.0
CG A:LYS14 4.9 32.2 1.0

Reference:

M.V.Pattarkine, J.J.Tanner, C.A.Bottoms, Y.-H.Lee, J.D.Wall. Desulfovibrio Desulfuricans G20 Tetraheme Cytochrome Structure at 1.5A and Cytochrome Interaction with Metal Complexes J.Mol.Biol. V. 358 1314 2006.
ISSN: ISSN 0022-2836
PubMed: 16580681
DOI: 10.1016/J.JMB.2006.03.010
Page generated: Tue Dec 15 05:16:48 2020

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