Molybdenum in PDB 2h5y: Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate

The structure of Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate, PDB code: 2h5y was solved by A.Balan, C.P.Santacruz, L.C.S.Ferreira, J.A.R.G.Barbosa, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	30.07 / 1.70
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	68.153, 172.138, 112.036, 90.00, 90.00, 90.00
R / Rfree (%)	16.7 / 20.2

The binding sites of Molybdenum atom in the Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate (pdb code 2h5y). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 3 binding sites of Molybdenum where determined in the Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate, PDB code: 2h5y:
Jump to Molybdenum binding site number: 1; 2; 3;

Molybdenum binding site 1 out of 3 in the Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo1300 b:24.4 occ:1.00 MO A:MOO1300 0.0 24.4 1.0 O1 A:MOO1300 1.8 23.4 1.0 O2 A:MOO1300 1.8 23.4 1.0 O4 A:MOO1300 1.8 24.4 1.0 O3 A:MOO1300 1.8 25.7 1.0 CB A:ALA58 3.9 24.6 1.0 CG1 A:VAL152 4.0 23.9 1.0 CE2 A:TYR170 4.1 22.8 1.0 N A:ALA11 4.1 22.7 1.0 CD A:PRO124 4.2 22.4 1.0 OH A:TYR170 4.2 24.4 1.0 CG1 A:VAL123 4.2 22.1 1.0 CB A:VAL152 4.2 23.4 1.0 OG A:SER39 4.2 23.4 1.0 N A:VAL152 4.2 22.3 1.0 CB A:ALA10 4.3 22.9 1.0 OG A:SER12 4.3 22.3 1.0 N A:SER39 4.3 22.6 1.0 N A:SER12 4.4 22.7 1.0 CA A:ALA38 4.5 23.4 1.0 N A:ALA125 4.5 22.8 1.0 CB A:ALA11 4.5 22.8 1.0 CB A:PRO124 4.6 23.6 1.0 CG A:PRO124 4.6 22.3 1.0 CZ A:TYR170 4.7 22.8 1.0 CA A:ALA10 4.7 23.1 1.0 N A:PRO124 4.7 22.9 1.0 C A:ALA10 4.7 23.3 1.0 CB A:ALA125 4.8 22.5 1.0 CB A:SER12 4.8 22.3 1.0 CA A:ALA11 4.8 22.8 1.0 CA A:VAL152 4.8 23.2 1.0 C A:ALA38 5.0 22.9 1.0 O A:ALA37 5.0 24.1 1.0

Molybdenum binding site 2 out of 3 in the Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate within 5.0Å range: probe atom residue distance (Å) B Occ B:Mo2300 b:24.7 occ:1.00 MO B:MOO2300 0.0 24.7 1.0 O1 B:MOO2300 1.7 24.1 1.0 O4 B:MOO2300 1.7 22.6 1.0 O3 B:MOO2300 1.8 23.8 1.0 O2 B:MOO2300 1.8 24.6 1.0 CB B:ALA58 3.8 24.6 1.0 CG1 B:VAL152 3.9 24.0 1.0 CG1 B:VAL123 4.1 22.7 1.0 CD B:PRO124 4.1 23.4 1.0 CE2 B:TYR170 4.1 22.6 1.0 N B:ALA11 4.1 22.4 1.0 OH B:TYR170 4.2 23.6 1.0 CB B:VAL152 4.2 23.9 1.0 CB B:ALA10 4.2 21.9 1.0 OG B:SER12 4.3 23.2 1.0 N B:VAL152 4.3 22.4 1.0 OG B:SER39 4.3 23.0 1.0 N B:SER39 4.3 22.9 1.0 N B:SER12 4.4 21.9 1.0 CA B:ALA38 4.4 23.2 1.0 CB B:PRO124 4.4 22.6 1.0 N B:ALA125 4.5 22.2 1.0 CB B:ALA11 4.5 22.4 1.0 CG B:PRO124 4.5 23.3 1.0 CZ B:TYR170 4.7 22.7 1.0 CA B:ALA10 4.7 22.6 1.0 CB B:ALA125 4.7 22.7 1.0 N B:PRO124 4.7 22.8 1.0 C B:ALA10 4.7 22.2 1.0 CB B:SER12 4.8 23.1 1.0 CA B:ALA11 4.8 22.5 1.0 CA B:VAL152 4.9 23.8 1.0 C B:ALA38 4.9 23.4 1.0 CB B:ALA38 4.9 23.2 1.0 O B:ALA37 5.0 24.1 1.0

Molybdenum binding site 3 out of 3 in the Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 3 of Crystallographic Structure of the Molybdate-Binding Protein of Xanthomonas Citri at 1.7 Ang Resolution Bound to Molybdate within 5.0Å range: probe atom residue distance (Å) B Occ C:Mo3300 b:24.2 occ:1.00 MO C:MOO3300 0.0 24.2 1.0 O1 C:MOO3300 1.7 24.5 1.0 O4 C:MOO3300 1.8 23.8 1.0 O2 C:MOO3300 1.8 23.4 1.0 O3 C:MOO3300 1.8 24.9 1.0 CB C:ALA58 3.8 24.2 1.0 CG1 C:VAL152 4.0 22.5 1.0 CE2 C:TYR170 4.1 24.1 1.0 OH C:TYR170 4.1 23.6 1.0 CG1 C:VAL123 4.2 21.3 1.0 N C:ALA11 4.2 22.0 1.0 CB C:VAL152 4.2 23.8 1.0 CD C:PRO124 4.2 21.1 1.0 N C:VAL152 4.2 22.6 1.0 CB C:ALA10 4.2 22.5 1.0 OG C:SER12 4.3 23.0 1.0 OG C:SER39 4.3 22.9 1.0 N C:SER39 4.3 22.5 1.0 N C:SER12 4.4 21.8 1.0 CB C:PRO124 4.4 21.6 1.0 N C:ALA125 4.4 21.3 1.0 CB C:ALA11 4.5 21.9 1.0 CA C:ALA38 4.5 22.2 1.0 CG C:PRO124 4.5 21.6 1.0 CZ C:TYR170 4.7 22.6 1.0 N C:PRO124 4.7 21.3 1.0 CB C:SER12 4.8 22.3 1.0 CA C:ALA10 4.8 22.6 1.0 C C:ALA10 4.8 22.0 1.0 CA C:ALA11 4.8 21.3 1.0 CB C:ALA125 4.8 21.9 1.0 CA C:VAL152 4.9 22.6 1.0 C C:ALA38 5.0 21.9 1.0 CB C:SER39 5.0 22.4 1.0

C.P.Santacruz, A.Balan, L.C.Ferreira, J.A.R.G.Barbosa. Crystallization, Data Collection and Phasing of the Molybdate-Binding Protein of the Phytopathogen Xanthomonas Axonopodis Pv. Citri Acta Crystallogr.,Sect.F V. 62 289 2006.
ISSN: ESSN 1744-3091
PubMed: 16511325
DOI: 10.1107/S1744309106003812