Molybdenum in the structure of Crystal Structure of Bovine Xanthine Oxidase in Complex With Indole-3- Aldehyde (pdb 3nvz)

The binding sites of Molybdenum atom in the structure of Crystal Structure of Bovine Xanthine Oxidase in Complex With Indole-3- Aldehyde (pdb code 3nvz). This binding sites where shown with 5.0 Angstroms radius around Molybdenum atom. The 3nvz structure was solved by H.CAO, R.HILLE, with X-Ray Crystallography technique, brief refinement statistics is given in the table below: Resolution (A) 45.2-1.6 Space group P1211 a (A) 133.409 b (A) 73.704 c (A) 138.922 alpha (°) 90.00 beta (°) 97.12 gamma (°) 90.00 Rfactor (%) 21.5 Rfree (%) 24.6 Molybdenum Binding Sites: Molybdenum binding site 1 out of 2 in 3nvz Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Molybdenum in the PDB 3nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Molybdenum atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: C: Gln767, C: Phe798, C: Gly799, C: Glu802, C: Arg912, C: Ala1078, C: Ala1079, C: Glu1261, C: Mte1326, C: Mos1327, conact list: Atom Atom Distance (A) Mo NE2 C:Gln767 4.54 Mo O C:Phe798 4.64 Mo C C:Phe798 4.51 Mo N C:Gly799 4.20 Mo CA C:Gly799 4.07 Mo OE2 C:Glu802 4.71 Mo N C:Arg912 4.45 Mo CA C:Arg912 4.40 Mo C C:Ala1078 4.72 Mo CB C:Ala1078 4.29 Mo CA C:Ala1078 4.25 Mo N C:Ala1079 4.16 Mo OE1 C:Glu1261 4.66 Mo OE2 C:Glu1261 3.72 Mo CD C:Glu1261 4.06 Mo CG C:Glu1261 4.45 Mo C3' C:Mte1326 4.82 Mo S1' C:Mte1326 2.44 Mo C6 C:Mte1326 4.78 Mo C1' C:Mte1326 3.35 Mo S2' C:Mte1326 2.47 Mo C2' C:Mte1326 3.37 Mo S C:Mos1327 2.14 Mo O1 C:Mos1327 2.02 Mo MO C:Mos1327 0.00 Mo O2 C:Mos1327 1.74 interactive model: Molybdenum binding site 2 out of 2 in 3nvz Click to enlarge Click to enlarge Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 2 of Molybdenum in the PDB 3nvz. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Molybdenum atom, shown by VdW sphere Residues shown as a stick model or VDW spheres: L: Gln767, L: Phe798, L: Gly799, L: Glu802, L: Arg912, L: Ala1078, L: Ala1079, L: Glu1261, L: Mte1326, L: Mos1327, conact list: Atom Atom Distance (A) Mo NE2 L:Gln767 4.54 Mo O L:Phe798 4.64 Mo C L:Phe798 4.50 Mo N L:Gly799 4.18 Mo CA L:Gly799 4.09 Mo OE2 L:Glu802 4.77 Mo N L:Arg912 4.41 Mo CA L:Arg912 4.41 Mo C L:Ala1078 4.72 Mo CB L:Ala1078 4.27 Mo CA L:Ala1078 4.28 Mo N L:Ala1079 4.15 Mo OE1 L:Glu1261 4.62 Mo OE2 L:Glu1261 3.66 Mo CD L:Glu1261 4.02 Mo CG L:Glu1261 4.48 Mo C3' L:Mte1326 4.76 Mo S1' L:Mte1326 2.34 Mo C6 L:Mte1326 4.75 Mo C1' L:Mte1326 3.28 Mo S2' L:Mte1326 2.47 Mo C2' L:Mte1326 3.32 Mo S L:Mos1327 2.15 Mo O1 L:Mos1327 2.02 Mo MO L:Mos1327 0.00 Mo O2 L:Mos1327 1.72 interactive model: