Molybdenum in PDB 4dmr: Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate

The structure of Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate, PDB code: 4dmr was solved by A.S.Mcalpine, S.Bailey, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.90
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	80.970, 80.970, 230.130, 90.00, 90.00, 90.00
R / Rfree (%)	16 / 19.6

The binding sites of Molybdenum atom in the Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate (pdb code 4dmr). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate, PDB code: 4dmr:

Molybdenum binding site 1 out of 1 in the Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Reduced Dmso Reductase From Rhodobacter Capsulatus with Bound Dmso Substrate within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo784 b:13.6 occ:1.00 O A:O785 1.6 19.2 1.0 OG A:SER147 2.0 9.0 1.0 O A:DMS786 2.0 12.3 1.0 S13 A:PGD783 2.4 10.1 1.0 S13 A:PGD782 2.4 8.1 1.0 S12 A:PGD782 2.5 6.6 1.0 S12 A:PGD783 2.5 12.6 1.0 CB A:SER147 3.1 7.2 1.0 S A:DMS786 3.3 20.0 1.0 C13 A:PGD782 3.4 7.2 1.0 C12 A:PGD782 3.5 6.9 1.0 C13 A:PGD783 3.5 9.3 1.0 C12 A:PGD783 3.6 9.5 1.0 CA A:SER147 3.8 8.2 1.0 NE1 A:TRP116 3.9 9.7 1.0 C2 A:DMS786 4.0 16.7 1.0 N A:SER147 4.0 6.4 1.0 OH A:TYR114 4.2 14.7 1.0 CE1 A:HIS643 4.3 6.5 1.0 CE1 A:HIS649 4.3 6.2 1.0 NE2 A:HIS649 4.5 5.4 1.0 C1 A:DMS786 4.6 18.2 1.0 C A:TYR146 4.7 6.4 1.0 CE2 A:TRP116 4.7 8.5 1.0 C14 A:PGD782 4.9 7.6 1.0 CZ2 A:TRP116 4.9 7.9 1.0 CD1 A:TRP116 4.9 8.9 1.0 C14 A:PGD783 4.9 7.8 1.0 C11 A:PGD782 5.0 6.6 1.0

A.S.Mcalpine, A.G.Mcewan, S.Bailey. The High Resolution Crystal Structure of Dmso Reductase in Complex with Dmso. J.Mol.Biol. V. 275 613 1998.
ISSN: ISSN 0022-2836
PubMed: 9466935
DOI: 10.1006/JMBI.1997.1513