Chemical elements
  Molybdenum
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    Compounds
    PDB 1aa6-1qh8
    PDB 1r27-2jir
    PDB 2min-3unc
    PDB 3uni-4f6t
      3uni
      4dmr
      4f6t

Molybdenum in the structure of Reduced Dmso Reductase From Rhodobacter Capsulatus With Bound Dmso Substrate (pdb 4dmr)






The binding sites of Molybdenum atom in the structure of Reduced Dmso Reductase From Rhodobacter Capsulatus With Bound Dmso Substrate (pdb code 4dmr). This binding sites where shown with 5.0 Angstroms radius around Molybdenum atom.
The 4dmr structure was solved by A.S.MCALPINE, S.BAILEY, with X-Ray Crystallography technique, brief refinement statistics is given in the table below:
Resolution (A)20.0-1.9
Space groupP41212
a (A)80.970
b (A)80.970
c (A)230.130
alpha (°)90.00
beta (°)90.00
gamma (°)90.00
Rfactor (%)16
Rfree (%)19.6


Molybdenum Binding Sites:

Molybdenum binding site 1 out of 1 in 4dmr


Molybdenum binding site 1 out of 1 in 4dmr
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stereopicture of Molybdenum binding site 1 out of 1 in 4dmr
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Mono- and Stereo- picture of 5.0 Angstrom coordination sphere 1 of Molybdenum in the PDB 4dmr. Coordination sphere was calculated for all residues within 5.0 Angstroms distance from the central Molybdenum atom, shown by VdW sphere
Residues shown as a stick model or VDW spheres: A: Tyr114, A: Trp116, A: Tyr146, A: Ser147, A: His643, A: His649, A: Pgd782, A: Pgd783, A: O785, A: Dms786,

conact list:


AtomAtomDistance (A)
MoOH A:Tyr1144.15
MoCD1 A:Trp1164.88
MoCZ2 A:Trp1164.87
MoCE2 A:Trp1164.74
MoNE1 A:Trp1163.94
MoC A:Tyr1464.71
MoN A:Ser1474.02
MoCB A:Ser1473.11
MoOG A:Ser1471.96
MoCA A:Ser1473.77
MoCE1 A:His6434.32
MoNE2 A:His6494.53
MoCE1 A:His6494.35
MoS13 A:Pgd7822.36
MoC11 A:Pgd7824.97
MoC13 A:Pgd7823.45
MoC12 A:Pgd7823.49
MoC14 A:Pgd7824.87
MoS12 A:Pgd7822.45
MoS13 A:Pgd7832.35
MoC13 A:Pgd7833.49
MoC12 A:Pgd7833.60
MoC14 A:Pgd7834.90
MoS12 A:Pgd7832.51
MoO A:O7851.60
MoS A:Dms7863.26
MoO A:Dms7862.02
MoC2 A:Dms7863.96
MoC1 A:Dms7864.56

interactive model:




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