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Molybdenum in PDB 5g5g: Escherichia Coli Periplasmic Aldehyde Oxidase

Protein crystallography data

The structure of Escherichia Coli Periplasmic Aldehyde Oxidase, PDB code: 5g5g was solved by M.A.S.Correia, A.R.Otrelo-Cardoso, M.J.Romao, T.Santos-Silva, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.32 / 1.70
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 109.681, 78.342, 151.909, 90.00, 99.69, 90.00
R / Rfree (%) 13.8 / 16.7

Other elements in 5g5g:

The structure of Escherichia Coli Periplasmic Aldehyde Oxidase also contains other interesting chemical elements:

Iodine (I) 7 atoms
Iron (Fe) 8 atoms
Chlorine (Cl) 12 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Escherichia Coli Periplasmic Aldehyde Oxidase (pdb code 5g5g). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Escherichia Coli Periplasmic Aldehyde Oxidase, PDB code: 5g5g:

Molybdenum binding site 1 out of 1 in 5g5g

Go back to Molybdenum Binding Sites List in 5g5g
Molybdenum binding site 1 out of 1 in the Escherichia Coli Periplasmic Aldehyde Oxidase


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Escherichia Coli Periplasmic Aldehyde Oxidase within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mo922

b:12.9
occ:1.00
MO C:MOS922 0.0 12.9 1.0
O1 C:MOS922 1.8 12.8 1.0
O2 C:MOS922 2.1 14.5 1.0
S7' C:MCN921 2.3 9.9 1.0
S C:MOS922 2.3 14.3 0.6
S8' C:MCN921 2.3 10.0 1.0
OE2 C:GLU692 3.2 17.6 1.0
C8' C:MCN921 3.2 9.9 1.0
C7' C:MCN921 3.2 9.8 1.0
CD C:GLU692 3.9 14.9 1.0
N C:GLY508 4.1 12.0 1.0
CA C:GLY243 4.2 9.6 1.0
N C:GLY243 4.2 9.2 1.0
O C:HOH2558 4.3 31.9 1.0
CA C:GLY507 4.4 11.2 1.0
CG C:GLU692 4.5 13.3 1.0
NE2 C:GLN211 4.6 11.9 1.0
CA C:ARG350 4.6 10.9 1.0
C C:PHE242 4.6 9.8 1.0
CD1 C:LEU246 4.7 10.7 1.0
OE1 C:GLU692 4.7 14.9 1.0
C6' C:MCN921 4.7 9.8 1.0
C9' C:MCN921 4.8 9.8 1.0
C C:GLY507 4.8 11.7 1.0
N C:ARG350 4.8 10.6 1.0
O C:PHE242 4.8 10.7 1.0
CD C:PRO352 5.0 13.7 1.0
N C:ALA351 5.0 11.3 1.0

Reference:

M.A.Correia, A.R.Otrelo-Cardoso, V.Schwuchow, K.G.Sigfridsson Clauss, M.Haumann, M.J.Romao, S.Leimkuhler, T.Santos-Silva. The Escherichia Coli Periplasmic Aldehyde Oxidoreductase Is An Exceptional Member of the Xanthine Oxidase Family of Molybdoenzymes. Acs Chem.Biol. V. 11 2923 2016.
ISSN: ISSN 1554-8929
PubMed: 27622978
DOI: 10.1021/ACSCHEMBIO.6B00572
Page generated: Tue Dec 15 05:19:51 2020

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