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Molybdenum in PDB 6a72: Copper Transporter Protein

Protein crystallography data

The structure of Copper Transporter Protein, PDB code: 6a72 was solved by W.B.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 43.79 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 46.114, 87.582, 77.301, 90.00, 90.00, 90.00
R / Rfree (%) 17.4 / 21.1

Other elements in 6a72:

The structure of Copper Transporter Protein also contains other interesting chemical elements:

Calcium (Ca) 1 atom

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Copper Transporter Protein (pdb code 6a72). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the Copper Transporter Protein, PDB code: 6a72:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in 6a72

Go back to Molybdenum Binding Sites List in 6a72
Molybdenum binding site 1 out of 2 in the Copper Transporter Protein


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Copper Transporter Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo101

b:32.7
occ:1.00
MO1 A:9UX101 0.0 32.7 1.0
O1 A:9UX101 1.6 24.0 1.0
SG A:CYS14 2.4 34.7 1.0
S2 A:9UX101 2.4 29.8 1.0
S1 A:9UX101 2.5 29.4 1.0
SG A:CYS17 2.5 35.8 1.0
MO2 A:9UX101 2.9 30.8 1.0
CB A:CYS17 3.4 34.9 1.0
O2 A:9UX101 3.6 17.8 1.0
CB A:CYS14 3.7 36.6 1.0
N A:CYS14 3.8 38.3 1.0
CG2 A:THR13 3.9 36.7 1.0
N A:THR13 4.3 38.5 1.0
CA A:CYS14 4.3 37.9 1.0
C A:THR13 4.4 38.6 1.0
CA A:CYS17 4.7 36.5 1.0
CA A:THR13 4.7 39.0 1.0
N A:CYS17 4.7 37.8 1.0
O A:GLY11 4.9 38.8 1.0
CB A:THR13 4.9 39.6 1.0
O A:CYS14 4.9 37.4 1.0

Molybdenum binding site 2 out of 2 in 6a72

Go back to Molybdenum Binding Sites List in 6a72
Molybdenum binding site 2 out of 2 in the Copper Transporter Protein


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Copper Transporter Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo101

b:30.8
occ:1.00
MO2 A:9UX101 0.0 30.8 1.0
O2 A:9UX101 1.7 17.8 1.0
S1 A:9UX101 2.3 29.4 1.0
S2 A:9UX101 2.4 29.8 1.0
MO1 A:9UX101 2.9 32.7 1.0
O1 A:9UX101 3.4 24.0 1.0
CG2 A:THR13 3.9 36.7 1.0
SG A:CYS14 4.8 34.7 1.0
SG A:CYS17 4.9 35.8 1.0

Reference:

T.Fang, W.Chen, Y.Sheng, S.Yuan, Q.Tang, G.Li, G.Huang, J.Su, X.Zhang, J.Zang, Y.Liu. Tetrathiomolybdate Induces Dimerization of the Metal-Binding Domain of Atpase and Inhibits Platination of the Protein. Nat Commun V. 10 186 2019.
ISSN: ESSN 2041-1723
PubMed: 30643139
DOI: 10.1038/S41467-018-08102-Z
Page generated: Tue Dec 15 05:20:09 2020

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