Molybdenum in PDB 6h8b: Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Protein crystallography data
The structure of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K, PDB code: 6h8b
was solved by
U.Ermler,
J.Poppe,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
49.42 /
1.90
|
Space group
|
P 63 2 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
116.720,
116.720,
235.420,
90.00,
90.00,
120.00
|
R / Rfree (%)
|
23.4 /
24.7
|
Other elements in 6h8b:
The structure of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K also contains other interesting chemical elements:
Molybdenum Binding Sites:
Molybdenum binding site 1 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 1 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 1 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:10.0
occ:0.50
|
MO1
|
B:J7T301
|
0.0
|
10.0
|
0.5
|
O2
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O1
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O3
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O24
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O5
|
B:J7T301
|
2.1
|
30.0
|
0.0
|
O4
|
B:J7T301
|
2.3
|
30.0
|
0.0
|
MO2
|
B:J7T301
|
3.4
|
11.2
|
0.5
|
MO3
|
B:J7T301
|
3.4
|
13.3
|
0.5
|
MO4
|
B:J7T301
|
3.5
|
10.0
|
0.5
|
O26
|
B:J7T301
|
3.7
|
30.0
|
0.0
|
ND1
|
A:HIS156
|
3.7
|
30.7
|
1.0
|
O7
|
B:J7T301
|
3.7
|
30.0
|
0.0
|
O10
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O6
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O23
|
A:J8B304
|
4.0
|
24.7
|
0.7
|
MO8
|
B:J7T301
|
4.1
|
9.6
|
0.5
|
CB
|
B:PRO151
|
4.2
|
31.4
|
1.0
|
CE1
|
A:HIS156
|
4.2
|
29.3
|
1.0
|
O
|
A:HOH431
|
4.2
|
16.0
|
1.0
|
O20
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
O25
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
O
|
B:HOH456
|
4.5
|
38.4
|
1.0
|
O22
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
O9
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
O11
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
CG
|
A:HIS156
|
4.8
|
29.4
|
1.0
|
O8
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O27
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
CG
|
B:PRO151
|
4.9
|
33.7
|
1.0
|
|
Molybdenum binding site 2 out
of 41 in 6h8b
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Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 2 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 2 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:11.2
occ:0.50
|
MO2
|
B:J7T301
|
0.0
|
11.2
|
0.5
|
O6
|
B:J7T301
|
1.7
|
30.0
|
0.0
|
O8
|
B:J7T301
|
1.7
|
30.0
|
0.0
|
O24
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O25
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O7
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O5
|
B:J7T301
|
2.3
|
30.0
|
0.0
|
MO8
|
B:J7T301
|
3.3
|
9.6
|
0.5
|
MO1
|
B:J7T301
|
3.4
|
10.0
|
0.5
|
MO4
|
B:J7T301
|
3.6
|
10.0
|
0.5
|
O15
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O2
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
CB
|
A:HIS156
|
3.8
|
24.0
|
1.0
|
O22
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
ND1
|
A:HIS158
|
4.0
|
27.9
|
1.0
|
MO5
|
B:J7T301
|
4.0
|
11.8
|
0.5
|
O4
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
O11
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
O13
|
B:J7T301
|
4.1
|
30.0
|
0.0
|
CG
|
B:PRO151
|
4.2
|
33.7
|
1.0
|
ND1
|
A:HIS156
|
4.2
|
30.7
|
1.0
|
N
|
A:HIS157
|
4.2
|
25.4
|
1.0
|
O14
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
CE1
|
A:HIS158
|
4.3
|
28.8
|
1.0
|
O16
|
B:J7T301
|
4.4
|
30.0
|
0.0
|
CG
|
A:HIS156
|
4.4
|
29.4
|
1.0
|
CB
|
B:PRO151
|
4.5
|
31.4
|
1.0
|
CD2
|
A:HIS157
|
4.5
|
37.9
|
1.0
|
CB
|
A:HIS157
|
4.6
|
31.5
|
1.0
|
O3
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
O1
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
O26
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
CA
|
A:HIS157
|
4.9
|
27.8
|
1.0
|
O20
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
CG
|
A:HIS157
|
4.9
|
35.7
|
1.0
|
CD
|
B:PRO151
|
5.0
|
32.3
|
1.0
|
|
Molybdenum binding site 3 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 3 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 3 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:13.3
occ:0.50
|
MO3
|
B:J7T301
|
0.0
|
13.3
|
0.5
|
O27
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O10
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O9
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O3
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O4
|
B:J7T301
|
2.1
|
30.0
|
0.0
|
O26
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
MO1
|
B:J7T301
|
3.4
|
10.0
|
0.5
|
MO4
|
B:J7T301
|
3.4
|
10.0
|
0.5
|
MO9
|
B:J7T301
|
3.7
|
29.7
|
0.5
|
O1
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O5
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
NZ
|
B:LYS153
|
3.8
|
59.0
|
1.0
|
MO6
|
B:J7T301
|
4.0
|
12.8
|
0.5
|
O12
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
O18
|
B:J7T301
|
4.2
|
30.0
|
0.0
|
O20
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
O29
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
O19
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
O11
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
O2
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O24
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O
|
B:HOH456
|
4.9
|
38.4
|
1.0
|
O30
|
B:J7T301
|
5.0
|
30.0
|
0.0
|
O7
|
B:J7T301
|
5.0
|
30.0
|
0.0
|
|
Molybdenum binding site 4 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 4 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 4 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:10.0
occ:0.50
|
MO4
|
B:J7T301
|
0.0
|
10.0
|
0.5
|
O12
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O4
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O7
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O11
|
B:J7T301
|
2.1
|
30.0
|
0.0
|
O26
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O5
|
B:J7T301
|
2.4
|
30.0
|
0.0
|
MO6
|
B:J7T301
|
3.4
|
12.8
|
0.5
|
O25
|
B:J7T301
|
3.4
|
30.0
|
0.0
|
MO3
|
B:J7T301
|
3.4
|
13.3
|
0.5
|
O24
|
B:J7T301
|
3.5
|
30.0
|
0.0
|
MO1
|
B:J7T301
|
3.5
|
10.0
|
0.5
|
MO2
|
B:J7T301
|
3.6
|
11.2
|
0.5
|
MO8
|
B:J7T301
|
3.6
|
9.6
|
0.5
|
O3
|
B:J7T301
|
3.6
|
30.0
|
0.0
|
O19
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O20
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
CB
|
B:PRO151
|
3.8
|
31.4
|
1.0
|
O27
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O21
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O14
|
B:J7T301
|
4.1
|
30.0
|
0.0
|
MO7
|
B:J7T301
|
4.1
|
9.0
|
0.5
|
CG
|
B:PRO151
|
4.3
|
33.7
|
1.0
|
O16
|
B:J7T301
|
4.4
|
30.0
|
0.0
|
O30
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
CD
|
B:PRO151
|
4.5
|
32.3
|
1.0
|
O17
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
O8
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
CA
|
B:PRO151
|
4.5
|
30.0
|
1.0
|
CE1
|
A:HIS158
|
4.6
|
28.8
|
1.0
|
N
|
B:PRO151
|
4.6
|
29.1
|
1.0
|
O1
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
MO9
|
B:J7T301
|
4.8
|
29.7
|
0.5
|
O9
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
O18
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
ND1
|
A:HIS158
|
4.9
|
27.9
|
1.0
|
O10
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
|
Molybdenum binding site 5 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 5 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 5 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:11.8
occ:0.50
|
MO5
|
B:J7T301
|
0.0
|
11.8
|
0.5
|
O13
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O28
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O14
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O15
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O25
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O16
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
MO7
|
B:J7T301
|
3.3
|
9.0
|
0.5
|
MO8
|
B:J7T301
|
3.4
|
9.6
|
0.5
|
MO1
|
B:J7N302
|
3.8
|
20.2
|
0.5
|
O23
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O11
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O22
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
MO2
|
B:J7T301
|
4.0
|
11.2
|
0.5
|
CE1
|
A:HIS158
|
4.0
|
28.8
|
1.0
|
O8
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
CE2
|
B:PHE180
|
4.3
|
39.4
|
1.0
|
CA
|
B:GLY128
|
4.3
|
34.7
|
1.0
|
CZ
|
B:PHE180
|
4.4
|
40.6
|
1.0
|
O7
|
B:J7T301
|
4.4
|
30.0
|
0.0
|
O1
|
B:J7N302
|
4.5
|
30.0
|
0.0
|
O6
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
CD1
|
B:LEU176
|
4.5
|
35.5
|
1.0
|
CB
|
A:HIS157
|
4.6
|
31.5
|
1.0
|
O21
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
N
|
B:ALA129
|
4.6
|
36.4
|
1.0
|
O5
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
ND1
|
A:HIS158
|
4.7
|
27.9
|
1.0
|
N
|
B:GLY130
|
4.7
|
36.6
|
1.0
|
CG
|
B:LEU176
|
4.8
|
32.3
|
1.0
|
C
|
B:GLY128
|
4.8
|
31.8
|
1.0
|
N
|
B:GLY128
|
4.8
|
36.6
|
1.0
|
O17
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
|
Molybdenum binding site 6 out
of 41 in 6h8b
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Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 6 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 6 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:12.8
occ:0.50
|
MO6
|
B:J7T301
|
0.0
|
12.8
|
0.5
|
O18
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O19
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O26
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O17
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O20
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O11
|
B:J7T301
|
2.3
|
30.0
|
0.0
|
MO7
|
B:J7T301
|
3.3
|
9.0
|
0.5
|
MO4
|
B:J7T301
|
3.4
|
10.0
|
0.5
|
O
|
B:HOH447
|
3.6
|
25.4
|
1.0
|
MO8
|
B:J7T301
|
3.6
|
9.6
|
0.5
|
O21
|
B:J7T301
|
3.7
|
30.0
|
0.0
|
O29
|
B:J7T301
|
3.7
|
30.0
|
0.0
|
O12
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O16
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
MO3
|
B:J7T301
|
4.0
|
13.3
|
0.5
|
O9
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
CA
|
B:GLY127
|
4.0
|
40.1
|
1.0
|
O5
|
B:J7T301
|
4.1
|
30.0
|
0.0
|
O3
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
O4
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
N
|
B:GLY128
|
4.3
|
36.6
|
1.0
|
O27
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
MO9
|
B:J7T301
|
4.4
|
29.7
|
0.5
|
O23
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
O30
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
C
|
B:GLY127
|
4.7
|
42.5
|
1.0
|
OG
|
B:SER147
|
4.7
|
43.9
|
1.0
|
O14
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O25
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
O7
|
B:J7T301
|
5.0
|
30.0
|
0.0
|
|
Molybdenum binding site 7 out
of 41 in 6h8b
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Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 7 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 7 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:9.0
occ:0.50
|
MO7
|
B:J7T301
|
0.0
|
9.0
|
0.5
|
O21
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O23
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O14
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O17
|
B:J7T301
|
2.0
|
30.0
|
0.0
|
O11
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O16
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
MO6
|
B:J7T301
|
3.3
|
12.8
|
0.5
|
MO5
|
B:J7T301
|
3.3
|
11.8
|
0.5
|
MO8
|
B:J7T301
|
3.5
|
9.6
|
0.5
|
O25
|
B:J7T301
|
3.6
|
30.0
|
0.0
|
O19
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O20
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
N
|
B:GLY128
|
3.9
|
36.6
|
1.0
|
O28
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O
|
B:HOH447
|
4.1
|
25.4
|
1.0
|
MO4
|
B:J7T301
|
4.1
|
10.0
|
0.5
|
O
|
B:HOH450
|
4.3
|
26.3
|
1.0
|
N
|
B:ALA129
|
4.3
|
36.4
|
1.0
|
CA
|
B:GLY128
|
4.4
|
34.7
|
1.0
|
O26
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
CB
|
B:PHE146
|
4.5
|
31.9
|
1.0
|
O13
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
CD2
|
B:PHE146
|
4.6
|
32.3
|
1.0
|
O12
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
CD1
|
B:LEU176
|
4.6
|
35.5
|
1.0
|
O7
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
O5
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
CE1
|
A:HIS158
|
4.8
|
28.8
|
1.0
|
O18
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
CG
|
B:PHE146
|
4.8
|
31.8
|
1.0
|
C
|
B:GLY127
|
4.9
|
42.5
|
1.0
|
C
|
B:GLY128
|
4.9
|
31.8
|
1.0
|
CA
|
B:GLY127
|
4.9
|
40.1
|
1.0
|
O15
|
B:J7T301
|
4.9
|
30.0
|
0.0
|
O
|
B:SER147
|
5.0
|
29.9
|
1.0
|
O22
|
B:J7T301
|
5.0
|
30.0
|
0.0
|
|
Molybdenum binding site 8 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 8 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 8 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:9.6
occ:0.50
|
MO8
|
B:J7T301
|
0.0
|
9.6
|
0.5
|
O22
|
B:J7T301
|
1.8
|
30.0
|
0.0
|
O20
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O16
|
B:J7T301
|
1.9
|
30.0
|
0.0
|
O5
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O25
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O11
|
B:J7T301
|
2.5
|
30.0
|
0.0
|
MO2
|
B:J7T301
|
3.3
|
11.2
|
0.5
|
MO5
|
B:J7T301
|
3.4
|
11.8
|
0.5
|
O26
|
B:J7T301
|
3.4
|
30.0
|
0.0
|
O15
|
B:J7T301
|
3.5
|
30.0
|
0.0
|
MO7
|
B:J7T301
|
3.5
|
9.0
|
0.5
|
MO4
|
B:J7T301
|
3.6
|
10.0
|
0.5
|
MO6
|
B:J7T301
|
3.6
|
12.8
|
0.5
|
O14
|
B:J7T301
|
3.6
|
30.0
|
0.0
|
O17
|
B:J7T301
|
3.7
|
30.0
|
0.0
|
N
|
B:GLY128
|
3.7
|
36.6
|
1.0
|
O6
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
O7
|
B:J7T301
|
3.8
|
30.0
|
0.0
|
CA
|
B:GLY128
|
3.9
|
34.7
|
1.0
|
O3
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
MO1
|
B:J7T301
|
4.1
|
10.0
|
0.5
|
O2
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
O24
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
O4
|
B:J7T301
|
4.4
|
30.0
|
0.0
|
O2
|
B:J7N302
|
4.4
|
30.0
|
0.0
|
MO1
|
B:J7N302
|
4.5
|
20.2
|
0.5
|
O28
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
O18
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
C
|
B:GLY127
|
4.8
|
42.5
|
1.0
|
O23
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O13
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O8
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O21
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
O21
|
A:J7Q301
|
4.9
|
30.0
|
0.0
|
|
Molybdenum binding site 9 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 9 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 9 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo301
b:29.7
occ:0.50
|
MO9
|
B:J7T301
|
0.0
|
29.7
|
0.5
|
O27
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O31
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O29
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O30
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O19
|
B:J7T301
|
3.4
|
30.0
|
0.0
|
MO3
|
B:J7T301
|
3.7
|
13.3
|
0.5
|
OD2
|
B:ASP108
|
3.8
|
45.5
|
1.0
|
OD1
|
B:ASP108
|
3.9
|
45.6
|
1.0
|
O12
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
O
|
B:HOH409
|
4.0
|
38.0
|
1.0
|
O26
|
B:J7T301
|
4.0
|
30.0
|
0.0
|
OG
|
B:SER147
|
4.1
|
43.9
|
1.0
|
O9
|
B:J7T301
|
4.1
|
30.0
|
0.0
|
CG
|
B:ASP108
|
4.3
|
44.7
|
1.0
|
NZ
|
B:LYS153
|
4.3
|
59.0
|
1.0
|
MO6
|
B:J7T301
|
4.4
|
12.8
|
0.5
|
CE
|
B:LYS153
|
4.6
|
57.5
|
1.0
|
O18
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
O4
|
B:J7T301
|
4.7
|
30.0
|
0.0
|
O10
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
MO4
|
B:J7T301
|
4.8
|
10.0
|
0.5
|
CB
|
B:SER104
|
4.8
|
39.1
|
1.0
|
|
Molybdenum binding site 10 out
of 41 in 6h8b
Go back to
Molybdenum Binding Sites List in 6h8b
Molybdenum binding site 10 out
of 41 in the Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 10 of Molybdenum Storage Protein Prepared Under in Vivo-Like Conditions and Incubated with Atp and Molybdate at 303 K within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo302
b:20.2
occ:0.50
|
MO1
|
B:J7N302
|
0.0
|
20.2
|
0.5
|
O1
|
B:J7N302
|
2.1
|
30.0
|
0.0
|
O15
|
B:J7T301
|
2.2
|
30.0
|
0.0
|
O3
|
B:J7N302
|
2.2
|
30.0
|
0.0
|
O2
|
B:J7N302
|
2.3
|
30.0
|
0.0
|
O22
|
B:J7T301
|
3.3
|
30.0
|
0.0
|
MO2
|
B:J7N302
|
3.6
|
28.0
|
0.5
|
MO5
|
B:J7T301
|
3.8
|
11.8
|
0.5
|
O28
|
B:J7T301
|
3.9
|
30.0
|
0.0
|
CD2
|
A:HIS157
|
3.9
|
37.9
|
1.0
|
NE2
|
A:HIS157
|
4.0
|
37.6
|
1.0
|
CA
|
B:GLY128
|
4.1
|
34.7
|
1.0
|
O4
|
B:J7N302
|
4.1
|
30.0
|
0.0
|
CZ
|
B:PHE180
|
4.2
|
40.6
|
1.0
|
O16
|
B:J7T301
|
4.3
|
30.0
|
0.0
|
O5
|
B:J7N302
|
4.3
|
30.0
|
0.0
|
CG
|
A:HIS157
|
4.4
|
35.7
|
1.0
|
CE1
|
A:HIS157
|
4.5
|
39.4
|
1.0
|
MO8
|
B:J7T301
|
4.5
|
9.6
|
0.5
|
O25
|
B:J7T301
|
4.5
|
30.0
|
0.0
|
CB
|
B:LEU131
|
4.5
|
38.5
|
1.0
|
O6
|
B:J7T301
|
4.6
|
30.0
|
0.0
|
N
|
B:LEU131
|
4.7
|
37.4
|
1.0
|
C
|
B:GLY128
|
4.7
|
31.8
|
1.0
|
O21
|
A:J7Q301
|
4.7
|
30.0
|
0.0
|
ND1
|
A:HIS157
|
4.7
|
38.0
|
1.0
|
O13
|
B:J7T301
|
4.8
|
30.0
|
0.0
|
CE1
|
B:PHE180
|
4.8
|
37.6
|
1.0
|
O
|
B:GLY128
|
4.9
|
25.5
|
1.0
|
|
Reference:
S.Brunle,
J.Poppe,
R.Hail,
U.Demmer,
U.Ermler.
The Molybdenum Storage Protein - A Bionanolab For Creating Experimentally Alterable Polyoxomolybdate Clusters. J. Inorg. Biochem. V. 189 172 2018.
ISSN: ISSN 1873-3344
PubMed: 30278367
DOI: 10.1016/J.JINORGBIO.2018.09.011
Page generated: Sun Oct 6 16:35:11 2024
|