Atomistry » Molybdenum » PDB 6op4-8ccq » 7bkb
Atomistry »
  Molybdenum »
    PDB 6op4-8ccq »
      7bkb »

Molybdenum in PDB 7bkb: Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure)

Enzymatic activity of Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure)

All present enzymatic activity of Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure):
1.17.1.9; 1.2.7.12; 1.2.99.5;

Other elements in 7bkb:

The structure of Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure) also contains other interesting chemical elements:

Zinc (Zn) 4 atoms
Iron (Fe) 212 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure) (pdb code 7bkb). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure), PDB code: 7bkb:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in 7bkb

Go back to Molybdenum Binding Sites List in 7bkb
Molybdenum binding site 1 out of 2 in the Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure)


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure) within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mo501

b:78.4
occ:1.00
 S12 H:MGD503 2.6 43.9 1.0
S13 H:MGD502 2.7 42.8 1.0
S12 H:MGD502 2.7 42.8 1.0
SG H:CYS122 2.7 39.2 1.0
S13 H:MGD503 2.7 43.9 1.0
CB H:CYS122 3.1 39.2 1.0
C13 H:MGD502 3.7 42.8 1.0
C12 H:MGD502 3.7 42.8 1.0
C12 H:MGD503 3.7 43.9 1.0
C13 H:MGD503 3.8 43.9 1.0
CA H:CYS122 4.4 39.2 1.0
CE H:MET260 4.4 37.5 1.0
NH2 J:ARG13 4.5 39.1 1.0
CA H:GLY295 4.5 35.3 1.0
C10 H:MGD503 4.6 43.9 1.0
C11 H:MGD503 4.8 43.9 1.0
N H:GLY295 4.8 35.3 1.0
C11 H:MGD502 4.9 42.8 1.0

Molybdenum binding site 2 out of 2 in 7bkb

Go back to Molybdenum Binding Sites List in 7bkb
Molybdenum binding site 2 out of 2 in the Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure)


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Formate Dehydrogenase - Heterodisulfide Reductase - Formylmethanofuran Dehydrogenase Complex From Methanospirillum Hungatei (Hexameric, Composite Structure) within 5.0Å range:
probe atom residue distance (Å) B Occ
h:Mo501

b:78.4
occ:1.00
 S12 h:MGD503 2.6 43.9 1.0
S13 h:MGD502 2.7 42.8 1.0
S12 h:MGD502 2.7 42.8 1.0
SG h:CYS122 2.7 39.2 1.0
S13 h:MGD503 2.7 43.9 1.0
CB h:CYS122 3.1 39.2 1.0
C13 h:MGD502 3.7 42.8 1.0
C12 h:MGD502 3.7 42.8 1.0
C12 h:MGD503 3.7 43.9 1.0
C13 h:MGD503 3.8 43.9 1.0
CA h:CYS122 4.4 39.2 1.0
CE h:MET260 4.4 37.5 1.0
NH2 j:ARG13 4.5 39.1 1.0
CA h:GLY295 4.5 35.3 1.0
C10 h:MGD503 4.6 43.9 1.0
C11 h:MGD503 4.8 43.9 1.0
N h:GLY295 4.8 35.3 1.0
C11 h:MGD502 4.9 42.8 1.0

Reference:

T.Watanabe, O.Pfeil-Gardiner, J.Kahnt, J.Koch, S.Shima, B.J.Murphy. Three-Megadalton Complex of Methanogenic Electron-Bifurcating and Co 2 -Fixing Enzymes. Science V. 373 1151 2021.
ISSN: ESSN 1095-9203
PubMed: 34516836
DOI: 10.1126/SCIENCE.ABG5550
Page generated: Sun Oct 6 16:55:52 2024

Last articles

Zn in 9FS1
Zn in 9FS3
Zn in 9FS2
Zn in 9H3H
Zn in 9F29
Zn in 9F2A
Zn in 9EY2
Zn in 9F26
Zn in 9E8J
Zn in 9E8N
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy