Molybdenum in PDB 7px0: Drosophila Melanogaster Aldehyde Oxidase 1
Enzymatic activity of Drosophila Melanogaster Aldehyde Oxidase 1
All present enzymatic activity of Drosophila Melanogaster Aldehyde Oxidase 1:
1.2.3.8;
Protein crystallography data
The structure of Drosophila Melanogaster Aldehyde Oxidase 1, PDB code: 7px0
was solved by
G.Vilela-Alves,
C.Mota,
M.J.Romao,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
48.66 /
2.20
|
Space group
|
P 1 21 1
|
Cell size a, b, c (Å), α, β, γ (°)
|
144.663,
127.914,
152.547,
90,
110.63,
90
|
R / Rfree (%)
|
17.5 /
22
|
Other elements in 7px0:
The structure of Drosophila Melanogaster Aldehyde Oxidase 1 also contains other interesting chemical elements:
Molybdenum Binding Sites:
The binding sites of Molybdenum atom in the Drosophila Melanogaster Aldehyde Oxidase 1
(pdb code 7px0). This binding sites where shown within
5.0 Angstroms radius around Molybdenum atom.
In total 4 binding sites of Molybdenum where determined in the
Drosophila Melanogaster Aldehyde Oxidase 1, PDB code: 7px0:
Jump to Molybdenum binding site number:
1;
2;
3;
4;
Molybdenum binding site 1 out
of 4 in 7px0
Go back to
Molybdenum Binding Sites List in 7px0
Molybdenum binding site 1 out
of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 1 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mo1304
b:28.8
occ:0.53
|
MO
|
A:MOS1304
|
0.0
|
28.8
|
0.5
|
O2
|
A:MOS1304
|
1.8
|
22.3
|
0.5
|
O1
|
A:MOS1304
|
1.9
|
23.8
|
0.5
|
S1'
|
A:MTE1303
|
2.3
|
41.9
|
1.0
|
S
|
A:MOS1304
|
2.4
|
27.2
|
0.5
|
S2'
|
A:MTE1303
|
2.5
|
50.8
|
1.0
|
OE2
|
A:GLU1217
|
3.3
|
35.8
|
1.0
|
C1'
|
A:MTE1303
|
3.3
|
43.2
|
1.0
|
C2'
|
A:MTE1303
|
3.3
|
46.7
|
1.0
|
N
|
A:GLY1045
|
4.0
|
32.9
|
1.0
|
CA
|
A:GLY1044
|
4.0
|
29.4
|
1.0
|
N
|
A:GLY781
|
4.2
|
18.6
|
1.0
|
CD
|
A:GLU1217
|
4.2
|
33.0
|
1.0
|
C
|
A:TYR780
|
4.3
|
19.3
|
1.0
|
O
|
A:TYR780
|
4.3
|
20.6
|
1.0
|
CA
|
A:GLY781
|
4.4
|
18.1
|
1.0
|
C
|
A:GLY1044
|
4.6
|
32.4
|
1.0
|
C6
|
A:MTE1303
|
4.7
|
40.8
|
1.0
|
C3'
|
A:MTE1303
|
4.7
|
46.8
|
1.0
|
CA
|
A:ARG893
|
4.9
|
21.3
|
1.0
|
NE2
|
A:GLN749
|
4.9
|
16.4
|
1.0
|
CG
|
A:GLU1217
|
4.9
|
30.0
|
1.0
|
|
Molybdenum binding site 2 out
of 4 in 7px0
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Molybdenum Binding Sites List in 7px0
Molybdenum binding site 2 out
of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 2 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mo1304
b:40.1
occ:0.56
|
MO
|
B:MOS1304
|
0.0
|
40.1
|
0.6
|
O2
|
B:MOS1304
|
1.9
|
33.7
|
0.6
|
O1
|
B:MOS1304
|
1.9
|
38.5
|
0.6
|
S1'
|
B:MTE1303
|
2.3
|
56.0
|
1.0
|
S
|
B:MOS1304
|
2.3
|
32.3
|
0.6
|
S2'
|
B:MTE1303
|
2.6
|
52.7
|
1.0
|
C1'
|
B:MTE1303
|
3.3
|
48.1
|
1.0
|
C2'
|
B:MTE1303
|
3.4
|
49.2
|
1.0
|
OE2
|
B:GLU1217
|
3.4
|
44.0
|
1.0
|
N
|
B:GLY781
|
4.1
|
17.3
|
1.0
|
N
|
B:GLY1045
|
4.2
|
43.0
|
1.0
|
CA
|
B:GLY781
|
4.2
|
17.6
|
1.0
|
CA
|
B:GLY1044
|
4.2
|
35.7
|
1.0
|
C
|
B:TYR780
|
4.3
|
18.1
|
1.0
|
CD
|
B:GLU1217
|
4.4
|
36.4
|
1.0
|
O
|
B:TYR780
|
4.5
|
17.1
|
1.0
|
NE2
|
B:GLN749
|
4.7
|
18.4
|
1.0
|
C6
|
B:MTE1303
|
4.7
|
44.6
|
1.0
|
C
|
B:GLY1044
|
4.8
|
36.4
|
1.0
|
C3'
|
B:MTE1303
|
4.8
|
47.9
|
1.0
|
CA
|
B:ARG893
|
4.9
|
22.9
|
1.0
|
CA
|
B:TYR780
|
5.0
|
18.9
|
1.0
|
CG
|
B:GLU1217
|
5.0
|
31.0
|
1.0
|
N
|
B:ARG893
|
5.0
|
24.3
|
1.0
|
|
Molybdenum binding site 3 out
of 4 in 7px0
Go back to
Molybdenum Binding Sites List in 7px0
Molybdenum binding site 3 out
of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 3 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mo1304
b:38.8
occ:0.58
|
MO
|
C:MOS1304
|
0.0
|
38.8
|
0.6
|
O1
|
C:MOS1304
|
1.9
|
31.2
|
0.6
|
O2
|
C:MOS1304
|
1.9
|
34.3
|
0.6
|
S1'
|
C:MTE1303
|
2.3
|
52.0
|
1.0
|
S
|
C:MOS1304
|
2.4
|
31.4
|
0.6
|
S2'
|
C:MTE1303
|
2.6
|
58.6
|
1.0
|
C1'
|
C:MTE1303
|
3.3
|
50.2
|
1.0
|
OE2
|
C:GLU1217
|
3.3
|
35.4
|
1.0
|
C2'
|
C:MTE1303
|
3.3
|
52.0
|
1.0
|
N
|
C:GLY1045
|
4.1
|
38.1
|
1.0
|
N
|
C:GLY781
|
4.2
|
21.9
|
1.0
|
CA
|
C:GLY1044
|
4.2
|
37.7
|
1.0
|
CD
|
C:GLU1217
|
4.3
|
35.8
|
1.0
|
CA
|
C:GLY781
|
4.3
|
21.4
|
1.0
|
C
|
C:TYR780
|
4.4
|
22.9
|
1.0
|
O
|
C:TYR780
|
4.6
|
23.0
|
1.0
|
C
|
C:GLY1044
|
4.7
|
41.3
|
1.0
|
NE2
|
C:GLN749
|
4.7
|
22.1
|
1.0
|
C6
|
C:MTE1303
|
4.7
|
47.4
|
1.0
|
C3'
|
C:MTE1303
|
4.8
|
53.7
|
1.0
|
CA
|
C:ARG893
|
4.9
|
25.9
|
1.0
|
CG
|
C:GLU1217
|
5.0
|
32.5
|
1.0
|
|
Molybdenum binding site 4 out
of 4 in 7px0
Go back to
Molybdenum Binding Sites List in 7px0
Molybdenum binding site 4 out
of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1
Mono view
Stereo pair view
|
A full contact list of Molybdenum with other atoms in the Mo binding
site number 4 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mo1304
b:39.0
occ:0.56
|
MO
|
D:MOS1304
|
0.0
|
39.0
|
0.6
|
O1
|
D:MOS1304
|
1.8
|
32.5
|
0.6
|
O2
|
D:MOS1304
|
1.9
|
38.8
|
0.6
|
S1'
|
D:MTE1303
|
2.3
|
44.9
|
1.0
|
S
|
D:MOS1304
|
2.4
|
33.1
|
0.6
|
S2'
|
D:MTE1303
|
2.5
|
66.8
|
1.0
|
C1'
|
D:MTE1303
|
3.3
|
49.3
|
1.0
|
C2'
|
D:MTE1303
|
3.4
|
48.3
|
1.0
|
OE2
|
D:GLU1217
|
3.6
|
37.8
|
1.0
|
N
|
D:GLY1045
|
3.9
|
43.9
|
1.0
|
CA
|
D:GLY1044
|
3.9
|
37.8
|
1.0
|
N
|
D:GLY781
|
4.1
|
21.8
|
1.0
|
CA
|
D:GLY781
|
4.2
|
20.8
|
1.0
|
C
|
D:TYR780
|
4.3
|
24.5
|
1.0
|
C
|
D:GLY1044
|
4.5
|
43.5
|
1.0
|
O
|
D:TYR780
|
4.5
|
22.4
|
1.0
|
CD
|
D:GLU1217
|
4.5
|
37.9
|
1.0
|
NE2
|
D:GLN749
|
4.5
|
25.1
|
1.0
|
C6
|
D:MTE1303
|
4.7
|
47.7
|
1.0
|
C3'
|
D:MTE1303
|
4.8
|
47.5
|
1.0
|
CA
|
D:ARG893
|
5.0
|
23.2
|
1.0
|
CA
|
D:TYR780
|
5.0
|
24.3
|
1.0
|
|
Reference:
G.Vilela-Alves,
C.Mota,
M.J.Romao.
Drosophila Melanogaster'S Aldehyde Oxidase 1: the First Invertebrate Aox Structure To Be Published.
Page generated: Sun Oct 6 17:00:51 2024
|