Atomistry » Molybdenum » PDB 6op4-8ccq » 7px0
Atomistry »
  Molybdenum »
    PDB 6op4-8ccq »
      7px0 »

Molybdenum in PDB 7px0: Drosophila Melanogaster Aldehyde Oxidase 1

Enzymatic activity of Drosophila Melanogaster Aldehyde Oxidase 1

All present enzymatic activity of Drosophila Melanogaster Aldehyde Oxidase 1:
1.2.3.8;

Protein crystallography data

The structure of Drosophila Melanogaster Aldehyde Oxidase 1, PDB code: 7px0 was solved by G.Vilela-Alves, C.Mota, M.J.Romao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.66 / 2.20
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 144.663, 127.914, 152.547, 90, 110.63, 90
R / Rfree (%) 17.5 / 22

Other elements in 7px0:

The structure of Drosophila Melanogaster Aldehyde Oxidase 1 also contains other interesting chemical elements:

Iron (Fe) 16 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Drosophila Melanogaster Aldehyde Oxidase 1 (pdb code 7px0). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 4 binding sites of Molybdenum where determined in the Drosophila Melanogaster Aldehyde Oxidase 1, PDB code: 7px0:
Jump to Molybdenum binding site number: 1; 2; 3; 4;

Molybdenum binding site 1 out of 4 in 7px0

Go back to Molybdenum Binding Sites List in 7px0
Molybdenum binding site 1 out of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo1304

b:28.8
occ:0.53
MO A:MOS1304 0.0 28.8 0.5
O2 A:MOS1304 1.8 22.3 0.5
O1 A:MOS1304 1.9 23.8 0.5
S1' A:MTE1303 2.3 41.9 1.0
S A:MOS1304 2.4 27.2 0.5
S2' A:MTE1303 2.5 50.8 1.0
OE2 A:GLU1217 3.3 35.8 1.0
C1' A:MTE1303 3.3 43.2 1.0
C2' A:MTE1303 3.3 46.7 1.0
N A:GLY1045 4.0 32.9 1.0
CA A:GLY1044 4.0 29.4 1.0
N A:GLY781 4.2 18.6 1.0
CD A:GLU1217 4.2 33.0 1.0
C A:TYR780 4.3 19.3 1.0
O A:TYR780 4.3 20.6 1.0
CA A:GLY781 4.4 18.1 1.0
C A:GLY1044 4.6 32.4 1.0
C6 A:MTE1303 4.7 40.8 1.0
C3' A:MTE1303 4.7 46.8 1.0
CA A:ARG893 4.9 21.3 1.0
NE2 A:GLN749 4.9 16.4 1.0
CG A:GLU1217 4.9 30.0 1.0

Molybdenum binding site 2 out of 4 in 7px0

Go back to Molybdenum Binding Sites List in 7px0
Molybdenum binding site 2 out of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mo1304

b:40.1
occ:0.56
MO B:MOS1304 0.0 40.1 0.6
O2 B:MOS1304 1.9 33.7 0.6
O1 B:MOS1304 1.9 38.5 0.6
S1' B:MTE1303 2.3 56.0 1.0
S B:MOS1304 2.3 32.3 0.6
S2' B:MTE1303 2.6 52.7 1.0
C1' B:MTE1303 3.3 48.1 1.0
C2' B:MTE1303 3.4 49.2 1.0
OE2 B:GLU1217 3.4 44.0 1.0
N B:GLY781 4.1 17.3 1.0
N B:GLY1045 4.2 43.0 1.0
CA B:GLY781 4.2 17.6 1.0
CA B:GLY1044 4.2 35.7 1.0
C B:TYR780 4.3 18.1 1.0
CD B:GLU1217 4.4 36.4 1.0
O B:TYR780 4.5 17.1 1.0
NE2 B:GLN749 4.7 18.4 1.0
C6 B:MTE1303 4.7 44.6 1.0
C B:GLY1044 4.8 36.4 1.0
C3' B:MTE1303 4.8 47.9 1.0
CA B:ARG893 4.9 22.9 1.0
CA B:TYR780 5.0 18.9 1.0
CG B:GLU1217 5.0 31.0 1.0
N B:ARG893 5.0 24.3 1.0

Molybdenum binding site 3 out of 4 in 7px0

Go back to Molybdenum Binding Sites List in 7px0
Molybdenum binding site 3 out of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 3 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mo1304

b:38.8
occ:0.58
MO C:MOS1304 0.0 38.8 0.6
O1 C:MOS1304 1.9 31.2 0.6
O2 C:MOS1304 1.9 34.3 0.6
S1' C:MTE1303 2.3 52.0 1.0
S C:MOS1304 2.4 31.4 0.6
S2' C:MTE1303 2.6 58.6 1.0
C1' C:MTE1303 3.3 50.2 1.0
OE2 C:GLU1217 3.3 35.4 1.0
C2' C:MTE1303 3.3 52.0 1.0
N C:GLY1045 4.1 38.1 1.0
N C:GLY781 4.2 21.9 1.0
CA C:GLY1044 4.2 37.7 1.0
CD C:GLU1217 4.3 35.8 1.0
CA C:GLY781 4.3 21.4 1.0
C C:TYR780 4.4 22.9 1.0
O C:TYR780 4.6 23.0 1.0
C C:GLY1044 4.7 41.3 1.0
NE2 C:GLN749 4.7 22.1 1.0
C6 C:MTE1303 4.7 47.4 1.0
C3' C:MTE1303 4.8 53.7 1.0
CA C:ARG893 4.9 25.9 1.0
CG C:GLU1217 5.0 32.5 1.0

Molybdenum binding site 4 out of 4 in 7px0

Go back to Molybdenum Binding Sites List in 7px0
Molybdenum binding site 4 out of 4 in the Drosophila Melanogaster Aldehyde Oxidase 1


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 4 of Drosophila Melanogaster Aldehyde Oxidase 1 within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mo1304

b:39.0
occ:0.56
MO D:MOS1304 0.0 39.0 0.6
O1 D:MOS1304 1.8 32.5 0.6
O2 D:MOS1304 1.9 38.8 0.6
S1' D:MTE1303 2.3 44.9 1.0
S D:MOS1304 2.4 33.1 0.6
S2' D:MTE1303 2.5 66.8 1.0
C1' D:MTE1303 3.3 49.3 1.0
C2' D:MTE1303 3.4 48.3 1.0
OE2 D:GLU1217 3.6 37.8 1.0
N D:GLY1045 3.9 43.9 1.0
CA D:GLY1044 3.9 37.8 1.0
N D:GLY781 4.1 21.8 1.0
CA D:GLY781 4.2 20.8 1.0
C D:TYR780 4.3 24.5 1.0
C D:GLY1044 4.5 43.5 1.0
O D:TYR780 4.5 22.4 1.0
CD D:GLU1217 4.5 37.9 1.0
NE2 D:GLN749 4.5 25.1 1.0
C6 D:MTE1303 4.7 47.7 1.0
C3' D:MTE1303 4.8 47.5 1.0
CA D:ARG893 5.0 23.2 1.0
CA D:TYR780 5.0 24.3 1.0

Reference:

G.Vilela-Alves, C.Mota, M.J.Romao. Drosophila Melanogaster'S Aldehyde Oxidase 1: the First Invertebrate Aox Structure To Be Published.
Page generated: Sun Oct 6 17:00:51 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy