Molybdenum in PDB 7ut7: C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions

All present enzymatic activity of C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions:
1.18.6.1;

The structure of C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions also contains other interesting chemical elements:

Iron

(Fe)

32 atoms

The binding sites of Molybdenum atom in the C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions (pdb code 7ut7). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions, PDB code: 7ut7:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in the C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo502 b:38.4 occ:1.00 MO1 A:ICS502 0.0 38.4 1.0 S1B A:ICS502 2.3 28.9 1.0 S4B A:ICS502 2.3 23.7 1.0 S3B A:ICS502 2.4 26.0 1.0 O5 A:HCA501 2.6 14.7 1.0 ND1 A:HIS442 2.7 27.3 1.0 FE6 A:ICS502 2.7 30.3 1.0 FE7 A:ICS502 2.7 35.2 1.0 FE5 A:ICS502 2.7 27.0 1.0 O7 A:HCA501 2.7 25.5 1.0 C7 A:HCA501 3.4 21.9 1.0 CX A:ICS502 3.5 19.8 1.0 CG A:HIS442 3.6 23.5 1.0 CE1 A:HIS442 3.6 17.6 1.0 C3 A:HCA501 3.7 19.6 1.0 CB A:HIS442 3.7 22.4 1.0 O1 A:HCA501 4.2 32.5 1.0 O A:HOH619 4.3 22.5 1.0 C5 A:HCA501 4.4 20.3 1.0 CA A:HIS442 4.5 22.0 1.0 O6 A:HCA501 4.6 31.9 1.0 C2 A:HCA501 4.6 23.9 1.0 C4 A:HCA501 4.7 27.1 1.0 NE2 A:HIS442 4.7 23.7 1.0 CD2 A:HIS442 4.7 16.4 1.0 S2B A:ICS502 4.8 23.7 1.0 S5A A:ICS502 4.8 26.8 1.0 S3A A:ICS502 4.9 30.0 1.0 C1 A:HCA501 4.9 25.8 1.0

Molybdenum binding site 2 out of 2 in the C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of C2 Symmetric Cryoem Structure of Azotobacter Vinelandii Mofep Under Non-Turnover Conditions within 5.0Å range: probe atom residue distance (Å) B Occ C:Mo502 b:35.4 occ:1.00 MO1 C:ICS502 0.0 35.4 1.0 S1B C:ICS502 2.3 25.7 1.0 S4B C:ICS502 2.3 19.8 1.0 S3B C:ICS502 2.4 24.6 1.0 O5 C:HCA501 2.6 10.6 1.0 ND1 C:HIS442 2.6 23.0 1.0 FE6 C:ICS502 2.7 27.3 1.0 FE7 C:ICS502 2.7 35.0 1.0 FE5 C:ICS502 2.7 28.2 1.0 O7 C:HCA501 2.7 21.5 1.0 C7 C:HCA501 3.4 20.0 1.0 CX C:ICS502 3.5 20.8 1.0 CE1 C:HIS442 3.6 15.3 1.0 CG C:HIS442 3.6 18.9 1.0 C3 C:HCA501 3.6 17.2 1.0 CB C:HIS442 3.8 20.2 1.0 O1 C:HCA501 4.2 28.8 1.0 C5 C:HCA501 4.3 17.4 1.0 O C:HOH624 4.4 19.5 1.0 CA C:HIS442 4.5 17.0 1.0 O6 C:HCA501 4.6 28.9 1.0 C2 C:HCA501 4.6 18.4 1.0 C4 C:HCA501 4.6 20.3 1.0 NE2 C:HIS442 4.7 19.6 1.0 CD2 C:HIS442 4.7 15.5 1.0 S2B C:ICS502 4.8 22.2 1.0 S5A C:ICS502 4.8 23.5 1.0 C1 C:HCA501 4.9 20.9 1.0 S3A C:ICS502 4.9 26.6 1.0

H.L.Rutledge, B.D.Cook, H.P.M.Nguyen, M.A.Herzik Jr., F.A.Tezcan. Structures of the Nitrogenase Complex Prepared Under Catalytic Turnover Conditions. Science V. 377 865 2022.
ISSN: ESSN 1095-9203
PubMed: 35901182
DOI: 10.1126/SCIENCE.ABQ7641