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Molybdenum in PDB 9bed: Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound

Protein crystallography data

The structure of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound, PDB code: 9bed was solved by D.Zhou, J.P.Rose, L.Chen, B.C.Wang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.36 / 2.02
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 74.713, 74.713, 156.01, 90, 90, 90
R / Rfree (%) 15.1 / 20.5

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound (pdb code 9bed). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 8 binding sites of Molybdenum where determined in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound, PDB code: 9bed:
Jump to Molybdenum binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Molybdenum binding site 1 out of 8 in 9bed

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Molybdenum binding site 1 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo101

b:17.6
occ:1.00
MO A:MOO101 0.0 17.6 1.0
O1 A:MOO101 1.7 11.4 1.0
O2 A:MOO101 1.7 18.0 1.0
O3 A:MOO101 1.7 23.3 1.0
O4 A:MOO101 1.8 16.4 1.0
HG3 A:LYS60 3.0 20.4 1.0
H D:SER40 3.2 16.7 1.0
HG2 A:ARG6 3.2 29.8 1.0
HA A:ALA5 3.3 23.8 1.0
H A:ALA61 3.3 20.4 1.0
HZ2 A:LYS60 3.4 15.5 1.0
HB D:ILE39 3.4 21.0 1.0
HG22 D:ILE39 3.5 18.5 1.0
HG2 A:LYS60 3.5 20.4 1.0
H A:ARG6 3.5 20.3 1.0
O A:SER4 3.6 19.6 1.0
CG A:LYS60 3.7 17.0 1.0
HG D:SER40 3.8 23.3 1.0
HA D:ILE39 3.8 23.9 1.0
HE2 A:LYS60 3.8 17.3 1.0
HB3 A:ALA61 3.9 19.3 1.0
HB2 A:SER4 3.9 22.9 1.0
HA A:LYS60 4.0 18.1 1.0
HG D:SER43 4.0 40.0 1.0
N D:SER40 4.0 13.9 1.0
CB D:ILE39 4.1 17.5 1.0
C A:SER4 4.1 19.0 1.0
CA A:ALA5 4.1 19.8 1.0
CG2 D:ILE39 4.1 15.4 1.0
N A:ALA61 4.1 17.0 1.0
HE A:ARG6 4.1 40.4 1.0
N A:ARG6 4.2 16.9 1.0
HG A:SER4 4.2 24.3 1.0
NZ A:LYS60 4.2 12.9 1.0
O D:HOH231 4.2 18.2 1.0
CG A:ARG6 4.2 24.9 1.0
OG A:SER4 4.2 20.2 1.0
HB3 D:SER40 4.2 24.0 1.0
HG2 F:MET65 4.2 23.9 1.0
HG21 D:ILE39 4.3 18.5 1.0
HB2 A:ALA61 4.3 19.3 1.0
CA D:ILE39 4.4 19.9 1.0
CE A:LYS60 4.4 14.4 1.0
N A:ALA5 4.4 17.5 1.0
HB3 D:SER43 4.4 29.6 1.0
OG D:SER40 4.5 19.4 1.0
HG3 A:ARG6 4.5 29.8 1.0
CB A:SER4 4.5 19.1 1.0
CB A:ALA61 4.5 16.1 1.0
HZ3 A:LYS60 4.6 15.5 1.0
C A:ALA5 4.6 18.8 1.0
OG D:SER43 4.6 33.4 1.0
CD A:LYS60 4.7 16.1 1.0
H A:THR62 4.7 17.8 1.0
CA A:LYS60 4.7 15.1 1.0
CB D:SER40 4.7 20.0 1.0
C D:ILE39 4.8 19.1 1.0
HZ1 A:LYS60 4.8 15.5 1.0
CB A:LYS60 4.8 18.6 1.0
NE A:ARG6 4.8 33.7 1.0
CD A:ARG6 4.9 30.7 1.0
HD2 A:ARG6 4.9 36.9 1.0
C A:LYS60 4.9 15.4 1.0
CA A:ALA61 5.0 16.8 1.0
CA A:SER4 5.0 17.0 1.0
CB D:SER43 5.0 24.7 1.0
HG23 D:ILE39 5.0 18.5 1.0

Molybdenum binding site 2 out of 8 in 9bed

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Molybdenum binding site 2 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo102

b:19.6
occ:1.00
MO A:MOO102 0.0 19.6 1.0
O1 A:MOO102 1.7 16.6 1.0
O3 A:MOO102 1.7 18.1 1.0
O4 A:MOO102 1.7 17.2 1.0
O2 A:MOO102 1.7 19.8 1.0
HG22 C:VAL21 3.4 22.5 1.0
H C:VAL21 3.5 21.4 1.0
HD22 A:ASN22 3.5 22.3 1.0
HD22 C:ASN22 3.5 21.0 1.0
HD22 F:ASN22 3.5 19.9 1.0
HG22 A:VAL21 3.5 25.4 1.0
HB3 F:ALA20 3.6 33.5 1.0
H C:ASN22 3.6 22.4 1.0
H F:VAL21 3.6 28.5 1.0
HG22 F:VAL21 3.6 21.4 1.0
H A:VAL21 3.6 20.9 1.0
H F:ALA20 3.6 32.4 1.0
H C:ALA20 3.6 28.1 1.0
HB3 C:ALA20 3.7 23.4 1.0
HB3 A:ALA20 3.7 26.5 1.0
HB2 A:ASN22 3.7 18.8 1.0
H A:ASN22 3.7 18.7 1.0
HB2 C:ASN22 3.7 20.1 1.0
H F:ASN22 3.7 23.3 1.0
H A:ALA20 3.8 24.7 1.0
HB2 F:ASN22 3.8 22.8 1.0
HG23 A:VAL21 4.1 25.4 1.0
HG23 F:VAL21 4.1 21.4 1.0
HG23 C:VAL21 4.2 22.5 1.0
CG2 C:VAL21 4.2 18.8 1.0
CG2 A:VAL21 4.2 21.1 1.0
ND2 A:ASN22 4.3 18.6 1.0
ND2 C:ASN22 4.3 17.5 1.0
CG2 F:VAL21 4.3 17.8 1.0
ND2 F:ASN22 4.3 16.6 1.0
N C:VAL21 4.3 17.9 1.0
N C:ASN22 4.3 18.7 1.0
N A:ASN22 4.4 15.6 1.0
N F:ALA20 4.4 27.0 1.0
N F:VAL21 4.5 23.8 1.0
N C:ALA20 4.5 23.4 1.0
N A:VAL21 4.5 17.4 1.0
N F:ASN22 4.5 19.4 1.0
CB F:ALA20 4.5 27.9 1.0
CB A:ASN22 4.6 15.7 1.0
CB C:ALA20 4.6 19.5 1.0
CB C:ASN22 4.6 16.8 1.0
CB A:ALA20 4.6 22.1 1.0
N A:ALA20 4.6 20.6 1.0
HA3 C:GLY19 4.7 20.9 1.0
CB F:ASN22 4.7 19.0 1.0
HA3 F:GLY19 4.7 30.7 1.0
HG21 A:VAL21 4.7 25.4 1.0
HG21 C:VAL21 4.8 22.5 1.0
HB2 F:ALA20 4.8 33.5 1.0
HD21 A:ASN22 4.8 22.3 1.0
HD21 F:ASN22 4.8 19.9 1.0
HD21 C:ASN22 4.8 21.0 1.0
HG21 F:VAL21 4.9 21.4 1.0
HB2 A:ALA20 4.9 26.5 1.0
HB2 C:ALA20 4.9 23.4 1.0
HA3 A:GLY19 4.9 22.9 1.0
CG A:ASN22 4.9 15.8 1.0
CA F:ALA20 5.0 22.9 1.0
CA C:ALA20 5.0 22.7 1.0
CG C:ASN22 5.0 17.7 1.0
CA C:ASN22 5.0 17.3 1.0

Molybdenum binding site 3 out of 8 in 9bed

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Molybdenum binding site 3 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 3 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mo101

b:17.2
occ:1.00
MO B:MOO101 0.0 17.2 1.0
O2 B:MOO101 1.6 14.3 1.0
O1 B:MOO101 1.7 15.3 1.0
O4 B:MOO101 1.7 19.6 1.0
O3 B:MOO101 1.7 17.5 1.0
HG3 B:LYS60 3.0 21.2 1.0
H C:SER40 3.2 16.3 1.0
HG2 B:ARG6 3.2 31.9 1.0
H B:ALA61 3.3 20.9 1.0
HZ2 B:LYS60 3.3 19.4 1.0
HA B:ALA5 3.3 20.3 1.0
HG2 B:LYS60 3.4 21.2 1.0
HG C:SER43 3.4 42.9 1.0
HB C:ILE39 3.5 19.7 1.0
HG22 C:ILE39 3.5 20.3 1.0
HG B:SER4 3.5 23.4 1.0
H B:ARG6 3.6 20.1 1.0
O B:SER4 3.6 17.7 1.0
CG B:LYS60 3.6 17.7 1.0
HG C:SER40 3.7 20.2 1.0
HB3 B:ALA61 3.8 22.1 1.0
HA C:ILE39 3.8 22.6 1.0
HE2 B:LYS60 3.9 22.7 1.0
HB2 B:SER4 4.0 21.5 1.0
N C:SER40 4.0 13.6 1.0
HA B:LYS60 4.0 17.2 1.0
HE B:ARG6 4.1 41.4 1.0
O C:HOH238 4.1 12.2 1.0
N B:ALA61 4.1 17.4 1.0
HB3 C:SER40 4.1 23.9 1.0
NZ B:LYS60 4.1 16.1 1.0
CB C:ILE39 4.1 16.4 1.0
C B:SER4 4.1 21.2 1.0
N B:ARG6 4.2 16.8 1.0
CA B:ALA5 4.2 16.9 1.0
OG B:SER4 4.2 19.5 1.0
CG B:ARG6 4.2 26.6 1.0
CG2 C:ILE39 4.2 16.9 1.0
OG C:SER43 4.2 35.8 1.0
HG2 E:MET65 4.2 23.5 1.0
CA C:ILE39 4.4 18.8 1.0
HB2 B:ALA61 4.4 22.1 1.0
OG C:SER40 4.4 16.9 1.0
CE B:LYS60 4.4 18.9 1.0
N B:ALA5 4.4 16.9 1.0
HG3 B:ARG6 4.4 31.9 1.0
HG21 C:ILE39 4.5 20.3 1.0
CB B:ALA61 4.5 18.4 1.0
HZ3 B:LYS60 4.5 19.4 1.0
CB B:SER4 4.5 17.9 1.0
HB2 C:SER43 4.5 31.4 1.0
C B:ALA5 4.6 18.4 1.0
CB C:SER40 4.6 20.0 1.0
HZ1 B:LYS60 4.6 19.4 1.0
H B:THR62 4.7 19.1 1.0
CA B:LYS60 4.7 14.3 1.0
CD B:LYS60 4.7 16.8 1.0
NE B:ARG6 4.7 34.5 1.0
CB B:LYS60 4.7 18.3 1.0
C C:ILE39 4.7 16.9 1.0
CB C:SER43 4.9 26.1 1.0
CD B:ARG6 4.9 26.9 1.0
HD2 B:ARG6 4.9 32.3 1.0
C B:LYS60 4.9 19.7 1.0
CA B:ALA61 4.9 19.0 1.0
CA C:SER40 4.9 19.7 1.0

Molybdenum binding site 4 out of 8 in 9bed

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Molybdenum binding site 4 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 4 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mo102

b:19.2
occ:1.00
MO B:MOO102 0.0 19.2 1.0
O4 B:MOO102 1.7 14.6 1.0
O3 B:MOO102 1.7 18.0 1.0
O1 B:MOO102 1.7 21.9 1.0
O2 B:MOO102 1.7 18.8 1.0
HD22 E:ASN22 3.4 24.3 1.0
H D:ALA20 3.5 25.6 1.0
HD22 B:ASN22 3.5 22.4 1.0
H D:VAL21 3.5 23.0 1.0
HD22 D:ASN22 3.5 20.4 1.0
H E:ALA20 3.6 26.5 1.0
HB3 E:ALA20 3.6 30.6 1.0
H B:VAL21 3.6 26.6 1.0
HG22 D:VAL21 3.6 21.8 1.0
H D:ASN22 3.6 19.8 1.0
H E:VAL21 3.6 21.7 1.0
HG22 B:VAL21 3.6 23.4 1.0
H B:ASN22 3.7 16.9 1.0
HB3 B:ALA20 3.7 22.4 1.0
HB2 B:ASN22 3.7 19.7 1.0
HB2 D:ASN22 3.7 19.3 1.0
HB3 D:ALA20 3.7 23.2 1.0
H E:ASN22 3.7 23.8 1.0
HG22 E:VAL21 3.7 24.6 1.0
H B:ALA20 3.8 22.7 1.0
HB2 E:ASN22 3.8 22.5 1.0
HG23 D:VAL21 3.9 21.8 1.0
HG23 B:VAL21 4.1 23.4 1.0
HG23 E:VAL21 4.1 24.6 1.0
ND2 E:ASN22 4.2 20.3 1.0
CG2 D:VAL21 4.2 18.1 1.0
CG2 B:VAL21 4.3 19.5 1.0
ND2 D:ASN22 4.3 17.0 1.0
ND2 B:ASN22 4.3 18.7 1.0
N D:ALA20 4.3 21.3 1.0
N D:VAL21 4.4 19.2 1.0
N D:ASN22 4.4 16.5 1.0
N E:ALA20 4.4 22.1 1.0
CG2 E:VAL21 4.4 20.5 1.0
N B:ASN22 4.4 14.1 1.0
N B:VAL21 4.4 22.1 1.0
N E:VAL21 4.5 18.1 1.0
CB E:ALA20 4.5 25.5 1.0
N E:ASN22 4.5 19.8 1.0
HA3 D:GLY19 4.6 21.6 1.0
CB D:ASN22 4.6 16.1 1.0
N B:ALA20 4.6 18.9 1.0
CB B:ASN22 4.6 16.4 1.0
CB D:ALA20 4.6 19.3 1.0
CB B:ALA20 4.6 18.6 1.0
HD21 E:ASN22 4.6 24.3 1.0
CB E:ASN22 4.7 18.8 1.0
HB2 E:ALA20 4.7 30.6 1.0
HA3 E:GLY19 4.7 27.8 1.0
HG21 D:VAL21 4.8 21.8 1.0
HD21 D:ASN22 4.8 20.4 1.0
HG21 B:VAL21 4.9 23.4 1.0
HA3 B:GLY19 4.9 22.6 1.0
HD21 B:ASN22 4.9 22.4 1.0
HB2 D:ALA20 4.9 23.2 1.0
CA E:ALA20 4.9 23.2 1.0
CA D:ALA20 4.9 20.6 1.0
CG E:ASN22 4.9 13.3 1.0
CG D:ASN22 5.0 15.9 1.0
HG21 E:VAL21 5.0 24.6 1.0
HB2 B:ALA20 5.0 22.4 1.0
CG B:ASN22 5.0 14.1 1.0

Molybdenum binding site 5 out of 8 in 9bed

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Molybdenum binding site 5 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 5 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mo101

b:19.0
occ:1.00
MO C:MOO101 0.0 19.0 1.0
O4 C:MOO101 1.7 19.2 1.0
O1 C:MOO101 1.7 20.5 1.0
O3 C:MOO101 1.7 16.0 1.0
O2 C:MOO101 1.7 20.6 1.0
HG3 C:LYS60 3.2 19.2 1.0
H B:SER40 3.2 19.4 1.0
HG2 C:ARG6 3.2 32.4 1.0
HZ1 C:LYS60 3.3 17.9 1.0
H C:ALA61 3.3 20.6 1.0
HA C:ALA5 3.3 18.7 1.0
HB B:ILE39 3.5 24.0 1.0
H C:ARG6 3.5 22.8 1.0
HG22 B:ILE39 3.5 19.7 1.0
HG2 C:LYS60 3.5 19.2 1.0
HG C:SER4 3.6 22.4 1.0
O C:SER4 3.6 19.9 1.0
HG B:SER40 3.7 18.8 1.0
HA B:ILE39 3.8 25.5 1.0
CG C:LYS60 3.8 16.0 1.0
HB3 C:ALA61 3.9 26.6 1.0
HB2 C:SER4 4.0 24.7 1.0
HE2 C:LYS60 4.0 18.4 1.0
N B:SER40 4.0 16.2 1.0
HA C:LYS60 4.0 19.3 1.0
HG B:SER43 4.1 32.3 1.0
HB3 B:SER40 4.1 19.2 1.0
NZ C:LYS60 4.1 14.9 1.0
N C:ARG6 4.1 19.0 1.0
CG C:ARG6 4.1 27.0 1.0
N C:ALA61 4.1 17.2 1.0
CB B:ILE39 4.1 20.0 1.0
CA C:ALA5 4.1 15.6 1.0
C C:SER4 4.1 20.5 1.0
HE C:ARG6 4.2 36.7 1.0
CG2 B:ILE39 4.2 16.4 1.0
O B:HOH222 4.2 16.1 1.0
OG C:SER4 4.3 18.7 1.0
HG2 A:MET65 4.3 24.2 1.0
HB3 B:SER43 4.3 28.1 1.0
HB2 C:ALA61 4.3 26.6 1.0
HG3 C:ARG6 4.3 32.4 1.0
CA B:ILE39 4.4 21.3 1.0
OG B:SER40 4.4 15.6 1.0
N C:ALA5 4.4 18.0 1.0
HZ2 C:LYS60 4.4 17.9 1.0
CE C:LYS60 4.5 15.4 1.0
CB C:ALA61 4.5 22.1 1.0
HG21 B:ILE39 4.5 19.7 1.0
CB C:SER4 4.6 20.6 1.0
C C:ALA5 4.6 16.7 1.0
CB B:SER40 4.6 16.0 1.0
H C:THR62 4.7 18.6 1.0
HZ3 C:LYS60 4.7 17.9 1.0
C B:ILE39 4.7 19.5 1.0
CA C:LYS60 4.8 16.1 1.0
CD C:LYS60 4.8 15.8 1.0
OG B:SER43 4.8 26.9 1.0
NE C:ARG6 4.8 30.6 1.0
CB C:LYS60 4.9 19.1 1.0
CB B:SER43 4.9 23.4 1.0
CD C:ARG6 4.9 26.5 1.0
HB2 C:ARG6 4.9 30.0 1.0
CA C:ALA61 4.9 20.4 1.0
CA B:SER40 5.0 16.9 1.0
C C:LYS60 5.0 15.1 1.0
HD2 C:ARG6 5.0 31.8 1.0
CB C:ARG6 5.0 25.0 1.0
HB2 B:SER43 5.0 28.1 1.0

Molybdenum binding site 6 out of 8 in 9bed

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Molybdenum binding site 6 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 6 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mo101

b:18.6
occ:1.00
MO D:MOO101 0.0 18.6 1.0
O4 D:MOO101 1.7 15.8 1.0
O3 D:MOO101 1.7 19.8 1.0
O1 D:MOO101 1.7 16.6 1.0
O2 D:MOO101 1.7 17.8 1.0
HG3 D:LYS60 3.1 21.9 1.0
H A:SER40 3.2 20.8 1.0
H D:ALA61 3.2 22.6 1.0
HA D:ALA5 3.4 24.5 1.0
HZ3 D:LYS60 3.4 22.5 1.0
HB A:ILE39 3.4 25.4 1.0
HG22 A:ILE39 3.5 24.1 1.0
HG D:SER4 3.5 22.6 1.0
HG2 D:LYS60 3.5 21.9 1.0
HG A:SER43 3.5 34.6 1.0
O D:SER4 3.6 18.8 1.0
HG A:SER40 3.6 25.6 1.0
CG D:LYS60 3.8 18.2 1.0
HA A:ILE39 3.8 23.4 1.0
HB3 D:ALA61 3.8 25.0 1.0
HE2 D:LYS60 3.9 23.2 1.0
HB2 D:SER4 4.0 21.6 1.0
N A:SER40 4.0 17.4 1.0
HA D:LYS60 4.0 22.2 1.0
N D:ALA61 4.1 18.8 1.0
C D:SER4 4.1 21.2 1.0
CG D:ARG6 4.1 20.6 1.0
CB A:ILE39 4.1 21.2 1.0
CG2 A:ILE39 4.1 20.1 1.0
O F:HOH222 4.1 22.4 1.0
NZ D:LYS60 4.2 18.7 1.0
N D:ARG6 4.2 18.6 1.0
CA D:ALA5 4.2 20.4 1.0
HB3 A:SER40 4.2 24.1 1.0
HB2 D:ALA61 4.2 25.0 1.0
OG D:SER4 4.2 18.8 1.0
HG21 A:ILE39 4.3 24.1 1.0
HG2 B:MET65 4.3 25.9 1.0
OG A:SER43 4.3 28.9 1.0
CA A:ILE39 4.4 19.5 1.0
N D:ALA5 4.4 18.4 1.0
CB D:ALA61 4.4 20.8 1.0
CE D:LYS60 4.4 19.3 1.0
OG A:SER40 4.4 21.3 1.0
HZ1 D:LYS60 4.5 22.5 1.0
HB2 A:SER43 4.5 29.0 1.0
CB D:SER4 4.5 18.0 1.0
C D:ALA5 4.6 22.2 1.0
H D:THR62 4.7 19.8 1.0
CB A:SER40 4.7 20.1 1.0
CD D:LYS60 4.7 17.1 1.0
C A:ILE39 4.7 21.8 1.0
CA D:LYS60 4.7 18.5 1.0
HZ2 D:LYS60 4.8 22.5 1.0
CB D:LYS60 4.9 18.2 1.0
CA D:ALA61 4.9 17.8 1.0
CB A:SER43 4.9 24.1 1.0
C D:LYS60 4.9 16.7 1.0
NE D:ARG6 4.9 35.0 1.0
CB D:ARG6 4.9 23.4 1.0
CD D:ARG6 5.0 25.1 1.0
CA D:SER4 5.0 21.2 1.0
HG23 A:ILE39 5.0 24.1 1.0
CA A:SER40 5.0 15.8 1.0

Molybdenum binding site 7 out of 8 in 9bed

Go back to Molybdenum Binding Sites List in 9bed
Molybdenum binding site 7 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 7 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mo101

b:20.2
occ:1.00
MO E:MOO101 0.0 20.2 1.0
O3 E:MOO101 1.7 21.9 1.0
O2 E:MOO101 1.7 14.6 1.0
O4 E:MOO101 1.7 20.4 1.0
O1 E:MOO101 1.7 21.5 1.0
H F:SER40 3.2 23.4 1.0
HG3 E:LYS60 3.2 18.6 1.0
HG2 E:ARG6 3.2 29.8 1.0
H E:ALA61 3.2 23.5 1.0
HA E:ALA5 3.3 25.7 1.0
HZ2 E:LYS60 3.4 19.3 1.0
HB F:ILE39 3.4 25.6 1.0
HG22 F:ILE39 3.6 24.6 1.0
HG2 E:LYS60 3.6 18.6 1.0
O E:SER4 3.6 23.2 1.0
HG F:SER40 3.6 27.5 1.0
H E:ARG6 3.6 26.7 1.0
HG F:SER43 3.6 28.7 1.0
HA F:ILE39 3.8 21.3 1.0
HB3 E:ALA61 3.8 20.2 1.0
CG E:LYS60 3.8 15.5 1.0
HE2 E:LYS60 3.9 22.1 1.0
N F:SER40 4.0 19.5 1.0
HB2 E:SER4 4.0 29.1 1.0
HA E:LYS60 4.1 23.9 1.0
N E:ALA61 4.1 19.6 1.0
CB F:ILE39 4.1 21.3 1.0
HG E:SER4 4.1 25.0 1.0
C E:SER4 4.1 25.7 1.0
CG E:ARG6 4.1 24.8 1.0
O C:HOH232 4.1 18.3 1.0
NZ E:LYS60 4.1 16.1 1.0
CA E:ALA5 4.2 21.4 1.0
HD3 E:ARG6 4.2 35.3 1.0
CG2 F:ILE39 4.2 20.5 1.0
HB3 F:SER40 4.2 24.4 1.0
N E:ARG6 4.2 22.3 1.0
HB2 E:ALA61 4.2 20.2 1.0
OG E:SER4 4.3 20.9 1.0
HD2 E:ARG6 4.3 35.3 1.0
HG2 D:MET65 4.3 25.4 1.0
CA F:ILE39 4.3 17.7 1.0
OG F:SER40 4.4 22.9 1.0
HG21 F:ILE39 4.4 24.6 1.0
HZ3 E:LYS60 4.4 19.3 1.0
N E:ALA5 4.4 22.0 1.0
CB E:ALA61 4.4 16.8 1.0
OG F:SER43 4.4 23.9 1.0
CE E:LYS60 4.4 18.4 1.0
CD E:ARG6 4.4 29.4 1.0
HB2 F:SER43 4.5 26.6 1.0
HG3 E:ARG6 4.5 29.8 1.0
CB E:SER4 4.6 24.2 1.0
C E:ALA5 4.7 24.6 1.0
H E:THR62 4.7 20.5 1.0
CB F:SER40 4.7 20.4 1.0
C F:ILE39 4.7 23.1 1.0
CA E:LYS60 4.8 19.9 1.0
CD E:LYS60 4.8 17.7 1.0
HZ1 E:LYS60 4.8 19.3 1.0
CA E:ALA61 4.9 19.9 1.0
CB E:LYS60 4.9 17.1 1.0
CB F:SER43 4.9 22.1 1.0
C E:LYS60 4.9 17.2 1.0

Molybdenum binding site 8 out of 8 in 9bed

Go back to Molybdenum Binding Sites List in 9bed
Molybdenum binding site 8 out of 8 in the Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 8 of Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound within 5.0Å range:
probe atom residue distance (Å) B Occ
F:Mo101

b:19.2
occ:1.00
MO F:MOO101 0.0 19.2 1.0
O1 F:MOO101 1.7 13.1 1.0
O3 F:MOO101 1.7 18.3 1.0
O4 F:MOO101 1.7 20.4 1.0
O2 F:MOO101 1.7 15.9 1.0
HG3 F:LYS60 3.2 20.8 1.0
H E:SER40 3.2 22.8 1.0
H F:ALA61 3.2 20.3 1.0
HG3 F:ARG6 3.3 24.7 1.0
HZ3 F:LYS60 3.3 24.9 1.0
HA F:ALA5 3.4 25.5 1.0
O F:SER4 3.4 21.5 1.0
HB E:ILE39 3.4 23.2 1.0
HG2 F:LYS60 3.6 20.8 1.0
HG22 E:ILE39 3.6 23.5 1.0
HG E:SER43 3.6 19.9 1.0
H F:ARG6 3.7 21.9 1.0
HG F:SER4 3.7 25.9 1.0
HA E:ILE39 3.7 20.7 1.0
HG E:SER40 3.8 24.1 1.0
CG F:LYS60 3.8 17.4 1.0
HE2 F:LYS60 3.8 19.9 1.0
HB3 F:ALA61 3.9 19.9 1.0
HB2 F:SER4 3.9 27.2 1.0
C F:SER4 4.0 22.4 1.0
N E:SER40 4.0 19.0 1.0
O D:HOH225 4.0 18.5 1.0
HA F:LYS60 4.0 21.9 1.0
N F:ALA61 4.1 16.9 1.0
CB E:ILE39 4.1 19.4 1.0
NZ F:LYS60 4.1 20.7 1.0
HB2 F:ALA61 4.1 19.9 1.0
CA F:ALA5 4.2 21.3 1.0
HB3 E:SER40 4.2 22.1 1.0
CG2 E:ILE39 4.2 19.6 1.0
CG F:ARG6 4.2 20.6 1.0
N F:ARG6 4.2 18.3 1.0
OG F:SER4 4.2 21.6 1.0
HZ1 F:LYS60 4.3 24.9 1.0
HG2 F:ARG6 4.3 24.7 1.0
HG21 E:ILE39 4.3 23.5 1.0
CA E:ILE39 4.3 17.3 1.0
HG2 C:MET65 4.3 20.2 1.0
CE F:LYS60 4.4 16.6 1.0
N F:ALA5 4.4 19.8 1.0
CB F:ALA61 4.4 16.6 1.0
OG E:SER43 4.4 16.5 1.0
OG E:SER40 4.5 20.1 1.0
HB2 E:SER43 4.5 22.2 1.0
CB F:SER4 4.5 22.6 1.0
H F:THR62 4.6 19.5 1.0
C F:ALA5 4.7 22.9 1.0
CB E:SER40 4.7 18.4 1.0
C E:ILE39 4.7 18.2 1.0
CD F:LYS60 4.7 15.5 1.0
CA F:LYS60 4.8 18.3 1.0
HZ2 F:LYS60 4.8 24.9 1.0
CA F:ALA61 4.9 22.6 1.0
CB F:LYS60 4.9 18.6 1.0
HD2 F:ARG6 4.9 34.4 1.0
CB E:SER43 4.9 18.5 1.0
HB2 F:ARG6 4.9 24.7 1.0
C F:LYS60 4.9 16.8 1.0
CA F:SER4 5.0 24.9 1.0

Reference:

D.Zhou, J.P.Rose, L.Chen, B.C.Wang. Tungstate Binding Protein (Tungbindin) From Eubacterium Limosum with Eight Molybdates Bound To Be Published.
Page generated: Sun Oct 6 17:44:55 2024

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