Molybdenum in PDB 8crs: Cryoem Structure of Nitrogenase Mofe-Protein in Detergent

All present enzymatic activity of Cryoem Structure of Nitrogenase Mofe-Protein in Detergent:
1.18.6.1;

The structure of Cryoem Structure of Nitrogenase Mofe-Protein in Detergent also contains other interesting chemical elements:

Iron

(Fe)

32 atoms

The binding sites of Molybdenum atom in the Cryoem Structure of Nitrogenase Mofe-Protein in Detergent (pdb code 8crs). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the Cryoem Structure of Nitrogenase Mofe-Protein in Detergent, PDB code: 8crs:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in the Cryoem Structure of Nitrogenase Mofe-Protein in Detergent


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Cryoem Structure of Nitrogenase Mofe-Protein in Detergent within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo501 b:36.8 occ:1.00 MO1 A:ICS501 0.0 36.8 1.0 O7 A:HCA502 2.2 29.3 1.0 O6 A:HCA502 2.2 26.4 1.0 ND1 A:HIS442 2.3 28.0 1.0 S4B A:ICS501 2.4 17.4 1.0 S1B A:ICS501 2.4 21.1 1.0 S3B A:ICS501 2.4 19.7 1.0 FE6 A:ICS501 2.7 34.4 1.0 FE7 A:ICS501 2.7 34.3 1.0 FE5 A:ICS501 2.7 38.9 1.0 C7 A:HCA502 3.0 20.1 1.0 C3 A:HCA502 3.1 23.6 1.0 CE1 A:HIS442 3.2 18.8 1.0 CG A:HIS442 3.4 8.7 1.0 CX A:ICS501 3.6 22.3 1.0 CB A:HIS442 3.8 20.0 1.0 O A:HOH688 3.9 16.9 1.0 O2 A:HCA502 4.0 33.0 1.0 O5 A:HCA502 4.1 28.1 1.0 C2 A:HCA502 4.1 20.2 1.0 C4 A:HCA502 4.1 16.4 1.0 NE2 A:HIS442 4.3 27.8 1.0 CD2 A:HIS442 4.5 25.1 1.0 CA A:HIS442 4.5 19.9 1.0 C5 A:HCA502 4.5 21.6 1.0 C1 A:HCA502 4.6 32.2 1.0 S2B A:ICS501 4.8 23.5 1.0 S5A A:ICS501 4.8 23.8 1.0 S3A A:ICS501 4.9 24.9 1.0

Molybdenum binding site 2 out of 2 in the Cryoem Structure of Nitrogenase Mofe-Protein in Detergent


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Cryoem Structure of Nitrogenase Mofe-Protein in Detergent within 5.0Å range: probe atom residue distance (Å) B Occ C:Mo501 b:36.6 occ:1.00 MO1 C:ICS501 0.0 36.6 1.0 O7 C:HCA502 2.2 29.7 1.0 O6 C:HCA502 2.2 24.4 1.0 ND1 C:HIS442 2.3 26.8 1.0 S4B C:ICS501 2.4 17.4 1.0 S1B C:ICS501 2.4 21.4 1.0 S3B C:ICS501 2.4 19.7 1.0 FE6 C:ICS501 2.7 34.0 1.0 FE7 C:ICS501 2.7 34.7 1.0 FE5 C:ICS501 2.7 38.8 1.0 C7 C:HCA502 3.0 18.6 1.0 C3 C:HCA502 3.1 23.3 1.0 CE1 C:HIS442 3.2 17.8 1.0 CG C:HIS442 3.4 9.7 1.0 CX C:ICS501 3.6 21.5 1.0 CB C:HIS442 3.7 20.1 1.0 O C:HOH683 3.9 17.4 1.0 O2 C:HCA502 4.0 34.0 1.0 C2 C:HCA502 4.1 19.9 1.0 O5 C:HCA502 4.1 25.8 1.0 C4 C:HCA502 4.2 17.0 1.0 NE2 C:HIS442 4.3 29.4 1.0 C5 C:HCA502 4.4 20.2 1.0 CD2 C:HIS442 4.5 25.6 1.0 CA C:HIS442 4.5 19.6 1.0 C1 C:HCA502 4.5 32.7 1.0 S2B C:ICS501 4.8 23.0 1.0 S5A C:ICS501 4.8 23.4 1.0 S3A C:ICS501 4.9 24.5 1.0

R.A.Warmack, A.O.Maggiolo, A.Orta, B.B.Wenke, J.B.Howard, D.C.Rees. Structural Consequences of Turnover-Induced Homocitrate Loss in Nitrogenase. Nat Commun V. 14 1091 2023.
ISSN: ESSN 2041-1723
PubMed: 36841829
DOI: 10.1038/S41467-023-36636-4