Molybdenum in PDB 8dby: Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon

All present enzymatic activity of Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon:
1.18.6.1;

The structure of Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon also contains other interesting chemical elements:

Iron

(Fe)

32 atoms

The binding sites of Molybdenum atom in the Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon (pdb code 8dby). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon, PDB code: 8dby:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in the Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo600 b:58.8 occ:1.00 MO1 A:ICS600 0.0 58.8 1.0 O6 A:HCA601 2.2 42.0 1.0 O7 A:HCA601 2.2 39.8 1.0 ND1 A:HIS442 2.3 38.8 1.0 S4B A:ICS600 2.4 32.4 1.0 S1B A:ICS600 2.4 33.3 1.0 S3B A:ICS600 2.4 22.1 1.0 FE7 A:ICS600 2.7 52.0 1.0 FE6 A:ICS600 2.7 57.3 1.0 FE5 A:ICS600 2.7 54.1 1.0 C7 A:HCA601 3.0 39.3 1.0 C3 A:HCA601 3.2 38.4 1.0 CE1 A:HIS442 3.2 33.5 1.0 CG A:HIS442 3.4 36.6 1.0 CX A:ICS600 3.6 42.9 1.0 CB A:HIS442 3.7 28.5 1.0 O2 A:HCA601 3.9 44.7 1.0 C2 A:HCA601 4.1 38.0 1.0 O A:HOH775 4.2 18.8 1.0 O5 A:HCA601 4.2 39.7 1.0 C4 A:HCA601 4.3 34.7 1.0 NE2 A:HIS442 4.4 34.5 1.0 CD2 A:HIS442 4.5 33.0 1.0 CA A:HIS442 4.5 31.1 1.0 C5 A:HCA601 4.5 30.3 1.0 C1 A:HCA601 4.5 38.3 1.0 S2B A:ICS600 4.8 35.5 1.0 S5A A:ICS600 4.8 33.9 1.0 S3A A:ICS600 4.9 40.4 1.0

Molybdenum binding site 2 out of 2 in the Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Cryoem Structure of Anaerobically Prepared Nitrogenase Mofe-Protein on Ultrathin Carbon within 5.0Å range: probe atom residue distance (Å) B Occ C:Mo600 b:59.6 occ:1.00 MO1 C:ICS600 0.0 59.6 1.0 O6 C:HCA601 2.2 42.0 1.0 O7 C:HCA601 2.2 39.3 1.0 ND1 C:HIS442 2.3 37.5 1.0 S4B C:ICS600 2.4 34.6 1.0 S1B C:ICS600 2.4 34.3 1.0 S3B C:ICS600 2.4 23.9 1.0 FE7 C:ICS600 2.7 52.7 1.0 FE6 C:ICS600 2.7 57.4 1.0 FE5 C:ICS600 2.7 54.5 1.0 C7 C:HCA601 3.0 39.6 1.0 C3 C:HCA601 3.2 38.5 1.0 CE1 C:HIS442 3.2 32.9 1.0 CG C:HIS442 3.4 36.5 1.0 CX C:ICS600 3.6 43.7 1.0 CB C:HIS442 3.7 28.6 1.0 O2 C:HCA601 3.9 45.0 1.0 C2 C:HCA601 4.1 38.6 1.0 O C:HOH781 4.2 18.5 1.0 O5 C:HCA601 4.2 40.0 1.0 C4 C:HCA601 4.3 35.7 1.0 NE2 C:HIS442 4.4 35.1 1.0 CD2 C:HIS442 4.4 34.0 1.0 C5 C:HCA601 4.5 31.7 1.0 CA C:HIS442 4.5 31.2 1.0 C1 C:HCA601 4.5 39.4 1.0 S2B C:ICS600 4.8 35.8 1.0 S5A C:ICS600 4.8 33.0 1.0 S3A C:ICS600 4.9 40.7 1.0

R.A.Warmack, D.C.Rees. Anaerobic Single Particle Cryoem of Nitrogenase To Be Published.