Molybdenum in PDB 8dfd: Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii

All present enzymatic activity of Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii:
1.18.6.1;

The structure of Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii also contains other interesting chemical elements:

Magnesium	(Mg)	4 atoms
Fluorine	(F)	16 atoms
Iron	(Fe)	40 atoms
Aluminium	(Al)	4 atoms

The binding sites of Molybdenum atom in the Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii (pdb code 8dfd). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii, PDB code: 8dfd:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in the Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ A:Mo600 b:44.8 occ:1.00 MO1 A:ICS600 0.0 44.8 1.0 O6 A:HCA601 2.2 33.4 1.0 O7 A:HCA601 2.2 30.9 1.0 ND1 A:HIS442 2.3 25.1 1.0 S4B A:ICS600 2.4 21.8 1.0 S1B A:ICS600 2.4 28.4 1.0 S3B A:ICS600 2.4 27.2 1.0 FE6 A:ICS600 2.7 43.5 1.0 FE7 A:ICS600 2.7 49.1 1.0 FE5 A:ICS600 2.7 46.2 1.0 C7 A:HCA601 3.0 28.9 1.0 C3 A:HCA601 3.1 32.1 1.0 CE1 A:HIS442 3.2 24.6 1.0 CG A:HIS442 3.4 23.2 1.0 CX A:ICS600 3.6 30.1 1.0 CB A:HIS442 3.7 28.6 1.0 O A:HOH760 4.0 18.9 1.0 O1 A:HCA601 4.1 34.1 1.0 C2 A:HCA601 4.2 29.6 1.0 C4 A:HCA601 4.2 30.4 1.0 O5 A:HCA601 4.2 33.8 1.0 C5 A:HCA601 4.2 26.0 1.0 NE2 A:HIS442 4.4 29.5 1.0 CD2 A:HIS442 4.5 29.2 1.0 CA A:HIS442 4.5 21.5 1.0 C1 A:HCA601 4.6 31.9 1.0 S2B A:ICS600 4.8 28.0 1.0 S5A A:ICS600 4.8 32.2 1.0 S3A A:ICS600 4.9 29.7 1.0 O A:HOH766 4.9 32.8 1.0

Molybdenum binding site 2 out of 2 in the Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of Cryoem Structure of the 2:1 Adp-Tetrafluoroaluminate Stabilized Nitrogenase Complex From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ C:Mo600 b:45.8 occ:1.00 MO1 C:ICS600 0.0 45.8 1.0 O6 C:HCA601 2.2 37.9 1.0 O7 C:HCA601 2.2 34.8 1.0 ND1 C:HIS442 2.3 29.2 1.0 S4B C:ICS600 2.4 20.9 1.0 S1B C:ICS600 2.4 25.8 1.0 S3B C:ICS600 2.4 28.4 1.0 FE6 C:ICS600 2.7 45.4 1.0 FE7 C:ICS600 2.7 43.8 1.0 FE5 C:ICS600 2.7 52.2 1.0 C7 C:HCA601 3.0 29.4 1.0 C3 C:HCA601 3.1 35.8 1.0 CE1 C:HIS442 3.2 27.0 1.0 CG C:HIS442 3.4 25.6 1.0 CX C:ICS600 3.6 33.5 1.0 CB C:HIS442 3.7 31.5 1.0 O C:HOH754 4.0 16.6 1.0 O2 C:HCA601 4.1 36.6 1.0 C2 C:HCA601 4.1 30.8 1.0 O5 C:HCA601 4.2 36.9 1.0 C4 C:HCA601 4.2 31.7 1.0 NE2 C:HIS442 4.3 32.3 1.0 C5 C:HCA601 4.4 32.6 1.0 CD2 C:HIS442 4.5 31.1 1.0 CA C:HIS442 4.5 26.7 1.0 C1 C:HCA601 4.6 33.4 1.0 S2B C:ICS600 4.8 30.9 1.0 S5A C:ICS600 4.8 35.6 1.0 S3A C:ICS600 4.9 31.5 1.0 O C:HOH783 4.9 36.5 1.0

R.A.Warmack, D.C.Rees. Anaerobic Single Particle Cryoem of Nitrogenase To Be Published.