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Molybdenum in PDB 8k8l: Structure of Klebsiella Pneumonia Moda with Molybdate

Protein crystallography data

The structure of Structure of Klebsiella Pneumonia Moda with Molybdate, PDB code: 8k8l was solved by Q.Zhao, M.Bartlam, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.76 / 1.77
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 28.102, 72.775, 125.234, 90, 90, 90
R / Rfree (%) 17 / 20.3

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the Structure of Klebsiella Pneumonia Moda with Molybdate (pdb code 8k8l). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total only one binding site of Molybdenum was determined in the Structure of Klebsiella Pneumonia Moda with Molybdate, PDB code: 8k8l:

Molybdenum binding site 1 out of 1 in 8k8l

Go back to Molybdenum Binding Sites List in 8k8l
Molybdenum binding site 1 out of 1 in the Structure of Klebsiella Pneumonia Moda with Molybdate


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of Structure of Klebsiella Pneumonia Moda with Molybdate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo301

b:53.8
occ:0.37
MO A:MOO301 0.0 53.8 0.4
O1 A:MOO301 1.7 37.1 0.4
O3 A:MOO301 1.7 31.4 0.4
O4 A:MOO301 1.7 20.9 0.4
O2 A:MOO301 1.7 32.6 0.4
O A:HOH409 3.3 42.2 1.0
O A:HOH429 3.4 22.3 1.0
O A:HOH516 3.5 30.9 1.0
OG A:SER63 3.7 19.0 1.0
O A:HOH406 3.7 35.9 1.0
N A:SER63 3.7 15.0 1.0
CB A:ALA82 4.0 19.2 1.0
O A:HOH568 4.0 50.9 1.0
CB A:SER63 4.0 18.4 1.0
CA A:SER62 4.5 18.5 1.0
CA A:SER63 4.5 17.8 1.0
CB A:SER62 4.6 17.9 1.0
C A:SER62 4.6 19.0 1.0

Reference:

Q.Zhao, X.Su, Y.Wang, R.Liu, M.Bartlam. Structural Analysis of Molybdate Binding Protein Moda From Klebsiella Pneumoniae. Biochem.Biophys.Res.Commun. V. 681 41 2023.
ISSN: ESSN 1090-2104
PubMed: 37751633
DOI: 10.1016/J.BBRC.2023.09.055
Page generated: Sun Oct 6 17:44:22 2024

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