Atomistry » Molybdenum » PDB 8cff-9d2c » 8uem
Atomistry »
  Molybdenum »
    PDB 8cff-9d2c »
      8uem »

Molybdenum in PDB 8uem: The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis

Other elements in 8uem:

The structure of The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis also contains other interesting chemical elements:

Iron (Fe) 8 atoms
Copper (Cu) 2 atoms

Molybdenum Binding Sites:

The binding sites of Molybdenum atom in the The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis (pdb code 8uem). This binding sites where shown within 5.0 Angstroms radius around Molybdenum atom.
In total 2 binding sites of Molybdenum where determined in the The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis, PDB code: 8uem:
Jump to Molybdenum binding site number: 1; 2;

Molybdenum binding site 1 out of 2 in 8uem

Go back to Molybdenum Binding Sites List in 8uem
Molybdenum binding site 1 out of 2 in the The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 1 of The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mo801

b:14.2
occ:1.00
MO A:CUN801 0.0 14.2 1.0
OM1 A:CUN801 1.8 21.7 1.0
OM2 A:CUN801 2.1 19.5 1.0
S A:CUN801 2.3 19.6 1.0
S7' A:MCN802 2.5 24.2 1.0
S8' A:MCN802 2.5 42.6 1.0
HO2 A:CUN801 2.7 19.7 1.0
OE2 A:GLU752 3.2 16.7 1.0
C7' A:MCN802 3.2 98.4 1.0
C8' A:MCN802 3.3 88.4 1.0
N A:GLY556 3.7 6.8 1.0
CD A:GLU752 3.8 13.8 1.0
CA A:TYR555 3.8 9.3 1.0
O A:HOH1060 3.9 16.6 1.0
CB A:TYR555 3.9 9.8 1.0
CU A:CUN801 3.9 45.7 1.0
CA A:GLY265 3.9 3.6 1.0
N A:GLY265 4.0 2.7 1.0
C A:TYR555 4.3 9.0 1.0
N A:ALA380 4.3 10.8 1.0
CA A:ALA380 4.3 9.5 1.0
C A:PHE264 4.3 5.0 1.0
OE1 A:GLU752 4.4 16.3 1.0
CG A:GLU752 4.4 10.9 1.0
NE2 A:GLN233 4.5 6.8 1.0
O A:PHE264 4.6 10.4 1.0
C6' A:MCN802 4.7 103.4 1.0
C9' A:MCN802 4.7 96.0 1.0
CA A:GLY556 4.8 10.9 1.0
CA A:PHE264 5.0 10.1 1.0

Molybdenum binding site 2 out of 2 in 8uem

Go back to Molybdenum Binding Sites List in 8uem
Molybdenum binding site 2 out of 2 in the The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis


Mono view


Stereo pair view

A full contact list of Molybdenum with other atoms in the Mo binding site number 2 of The Cryoem Structure of the High Affinity Carbon Monoxide Dehydrogenase From Mycobacterium Smegmatis within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mo801

b:13.7
occ:1.00
MO D:CUN801 0.0 13.7 1.0
OM1 D:CUN801 1.8 21.0 1.0
OM2 D:CUN801 2.1 19.5 1.0
S D:CUN801 2.3 18.4 1.0
S7' D:MCN802 2.7 25.9 1.0
S8' D:MCN802 2.7 42.3 1.0
HO2 D:CUN801 2.7 19.1 1.0
OE2 D:GLU752 3.1 15.6 1.0
C7' D:MCN802 3.3 98.9 1.0
C8' D:MCN802 3.4 87.8 1.0
N D:GLY556 3.6 7.3 1.0
CD D:GLU752 3.8 14.1 1.0
CA D:TYR555 3.8 9.1 1.0
CB D:TYR555 3.8 9.4 1.0
N D:GLY265 3.9 3.7 1.0
CA D:GLY265 3.9 3.6 1.0
CU D:CUN801 3.9 45.3 1.0
O D:HOH1021 3.9 17.2 1.0
C D:TYR555 4.2 8.7 1.0
N D:ALA380 4.3 11.1 1.0
C D:PHE264 4.3 5.1 1.0
CA D:ALA380 4.3 9.2 1.0
CG D:GLU752 4.4 10.7 1.0
NE2 D:GLN233 4.4 6.6 1.0
OE1 D:GLU752 4.4 17.3 1.0
CA D:GLY556 4.7 11.6 1.0
O D:PHE264 4.7 10.6 1.0
C6' D:MCN802 4.7 103.3 1.0
C9' D:MCN802 4.8 95.2 1.0
CA D:PHE264 4.9 10.2 1.0
C10 D:MCN802 5.0 97.5 1.0

Reference:

D.Gillett, A.Kropp, H.Venugopal, C.Barlow, C.Greening, R.Grinter. Structural Basis For Bacterial Energy Extraction From Atmospheric Hydrogen To Be Published.
Page generated: Thu Oct 31 22:46:38 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy